Oomycete Gene Order Browser

Genome Evolution Lab, Maynooth University


OGOB Data Files

Species Proteins (aa) Genes (nt) Genome Sequences (nt) Annotations (InterProScan)
Phytophthora infestans PHIF.faa PHIF.fna PHIF_genome.fna PHIF.tsv
Phytophthora parasitica PHPA.faa PHPA.fna PHPA_genome.fna PHPA.tsv
Plasmopara halstedii PLHA.faa PLHA.fna PLHA_genome.fna PLHA.tsv
Phytophthora capsici PHCA.faa PHCA.fna PHCA_genome.fna PHCA.tsv
Phytophthora sojae PHSO.faa PHSO.fna PHSO_genome.fna PHSO.tsv
Hyaloperonospora arabidopsidis HYAP.faa HYAP.fna HYAP_genome.fna HYAP.tsv
Phytophthora ramourm PHRA.faa PHRA.fna PHRA_genome.fna PHRA.tsv
Phytophthora kernoviae PHKE.faa PHKE.fna PHKE_genome.fna PHKE.tsv
Phytopythium vexans PPVX.faa PPVX.fna PPVX_genome.fna PPVX.tsv
Pythium irregulare PYIR.faa PYIR.fna PYIR_genome.fna PYIR.tsv
Pythium iwayami PYIW.faa PYIW.fna PYIW_genome.fna PYIW.tsv
Pythium ultimum PYUU.faa PYUU.fna PYUU_genome.fna PYUU.tsv
Pythium aphanidermatum PYAP.faa PYAP.fna PYAP_genome.fna PYAP.tsv
Pythium arrhenomanes PYAR.faa PYAR.fna PYAR_genome.fna PYAR.tsv
Albugo laibachii ALLA.faa ALLA.fna ALLA_genome.fna ALLA.tsv
Albugo candida ALCA.faa ALCA.fna ALCA_genome.fna ALCA.tsv
Saprolegnia parasitica SAPA.faa SAPA.fna SAPA_genome.fna SAPA.tsv
Saprolegnia diclina SADI.faa SADI.fna SADI_genome.fna SADI.tsv
Aphanomyces astaci APAS.faa APAS.fna APAS_genome.fna APAS.tsv
Aphanomyces invadans APIN.faa APIN.fna APIN_genome.fna APIN.tsv
All Species (319,881 proteins) AA.faa (136 MB) NT.fna (400 MB) ANNOTATIONS.tsv (137 MB)
OGOB Homology Data OGOB_Pillars.tsv
OGOB Homology Data

The file OGOB_Pillars.tsv lists all orthology pillars hoted in OGOB. The first row shows the species name that the genes in that column belong to. The order of the pillars is arbitrary and just contains the underlying orthology assignments used in OGOB.

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