Note:

Full BLAST raw output including alignments follows below the summary table

Hit Name Hit Start Hit End HSP Length HSP Score HSP Significance
ALCA:CCI45122:CCI45123:scaffold_90:8389:8676200280271485e-11
PLHA:PHALS_06429:PHALS_06430:NW_020189861.1:1584479:1589920236026921301253e-06
PHCA:PHYCA_505427:PHYCA_505430:scaffold_13:335559:345223659469321321163e-05
HYAP:HYAP_00251:HYAP_00252:scaffold_1:1195367:1195613117923880.006
APIN:H310_04844:H310_04845:scaffold_8:304741:3079402501265052950.010
PHCA:PHYCA_506484:PHYCA_111309:scaffold_20:128465:13046712551611143930.019
PHKE:PHYKE_2539:PHYKE_4609:scaffold_206:3712:95271789189938890.070
PYIR:PYIR_13555:PYIR_13563:scaffold_12:81537:901085142524336810.56
PHCA:PHYCA_548122:PHYCA_507454:scaffold_27:526448:5314171361145633781.4
PYUU:PYU1_G006039:PYU1_G006038:scaffold_2028:685517:6873561402151540762.3
PYAR:PYAR_19464:PYAR_19463:scaffold_995:5215:86632649281056762.4
PHCA:PHYCA_541391:PHYCA_5615:scaffold_6:1107992:11102731724193383744.3
PHSO:PHYSO_354313:PHYSO_354314:scaffold_3:3933721:393545282391832734.8
PHCA:PHYCA_9865:PHYCA_535841:scaffold_42:346165:3554773861399545736.0
PHKE:PHYKE_5585:PHYKE_5586:scaffold_223:50056:558501625174440727.4
PHCA:PHYCA_105082:PHYCA_504923:scaffold_10:479407:4813461462157841718.3
PHKE:PHYKE_4908:PHYKE_4909:scaffold_269:9588:130032296237627718.4
TBLASTN 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Database: OGOB.intergenic.fasta
           274,424 sequences; 626,110,404 total letters


Query= PYVX_18171


Length=294
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value


ALCA:CCI45122:CCI45123:scaffold_90:8389:8676                          61.6    5e-11
PLHA:PHALS_06429:PHALS_06430:NW_020189861.1:1584479:1589920           52.8    3e-06
PHCA:PHYCA_505427:PHYCA_505430:scaffold_13:335559:345223              49.3    3e-05
HYAP:HYAP_00251:HYAP_00252:scaffold_1:1195367:1195613                 38.5    0.006
APIN:H310_04844:H310_04845:scaffold_8:304741:307940                   41.2    0.010
PHCA:PHYCA_506484:PHYCA_111309:scaffold_20:128465:130467              40.4    0.019
PHKE:PHYKE_2539:PHYKE_4609:scaffold_206:3712:9527                     38.9    0.070
PYIR:PYIR_13555:PYIR_13563:scaffold_12:81537:90108                    35.8    0.56 
PHCA:PHYCA_548122:PHYCA_507454:scaffold_27:526448:531417              34.7    1.4  
PYUU:PYU1_G006039:PYU1_G006038:scaffold_2028:685517:687356            33.9    2.3  
PYAR:PYAR_19464:PYAR_19463:scaffold_995:5215:8663                     33.9    2.4  
PHCA:PHYCA_541391:PHYCA_5615:scaffold_6:1107992:1110273               33.1    4.3  
PHSO:PHYSO_354313:PHYSO_354314:scaffold_3:3933721:3935452             32.7    4.8  
PHCA:PHYCA_9865:PHYCA_535841:scaffold_42:346165:355477                32.7    6.0  
PHKE:PHYKE_5585:PHYKE_5586:scaffold_223:50056:55850                   32.3    7.4  
PHCA:PHYCA_105082:PHYCA_504923:scaffold_10:479407:481346              32.0    8.3  
PHKE:PHYKE_4908:PHYKE_4909:scaffold_269:9588:13003                    32.0    8.4  


>ALCA:CCI45122:CCI45123:scaffold_90:8389:8676
Length=287


 Score = 61.6 bits (148),  Expect = 5e-11, Method: Composition-based stats.
 Identities = 25/27 (93%), Positives = 26/27 (96%), Gaps = 0/27 (0%)
 Frame = +2


Query  11   PTSCEGYVTKRGHFRKSWRVRYLVLDG  37
            PTSCEGYVTKRGHFRKSWRVRYLV+ G
Sbjct  200  PTSCEGYVTKRGHFRKSWRVRYLVICG  280


>PLHA:PHALS_06429:PHALS_06430:NW_020189861.1:1584479:1589920
Length=5441


 Score = 52.8 bits (125),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 36/130 (28%), Positives = 60/130 (46%), Gaps = 23/130 (18%)
 Frame = +2


Query  7     NVVRPTSCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASK--GEFYLS  64
             ++  P +C GY+TK+GH RKSW+ RY +L G    ++Y+ S     N A  K   E  + 
Sbjct  2360  SIPEPVACAGYLTKQGHKRKSWKKRYFILRGN--TISYY-SDYDMANNAKGKPLAEVLVE  2530


Query  65    SIDKHayvaggmgavgaQEKPFGFKMVGHAPKKGYTELDIFVETLADLTKWLEVAH--NA  122
              + K             + +PFGF  V +     Y    ++ +   + TKW+   +  NA
Sbjct  2531  DVQKW------------EGEPFGFMFVTNEQVPYY----VYADNDRERTKWMNALNKINA  2662


Query  123   LESAAAMSRK  132
             +E    + +K
Sbjct  2663  VEEEPVVEKK  2692


 Score = 46.2 bits (108),  Expect = 3e-04, Method: Compositional matrix adjust.
 Identities = 21/54 (39%), Positives = 34/54 (63%), Gaps = 2/54 (4%)
 Frame = +2


Query  13    SCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSI  66
             SCEGY+TKRGH   S R+ Y VL+G  LR  ++  + A+++  ++  E  + S+
Sbjct  2078  SCEGYLTKRGHLVPSQRMAYYVLNGTSLR--HYTDQQAYRDNQSAMAEVEIRSV  2233


 Score = 42.4 bits (98),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 22/35 (63%), Gaps = 2/35 (6%)
 Frame = +2


Query  14    CEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESK  48
             CEGY+TKRGH   +W+ RY  L G  L   YF S+
Sbjct  1796  CEGYLTKRGHLFTNWKTRYFTLRGNVLE--YFSSE  1894


>PHCA:PHYCA_505427:PHYCA_505430:scaffold_13:335559:345223
Length=9664


 Score = 49.3 bits (116),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 22/132 (17%)
 Frame = +3


Query  7     NVVRPTSCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASK--GEFYLS  64
             NV  P SC GY+TK+GH RKSW+ RY +L G    ++Y+ S     N A  K   E  + 
Sbjct  6594  NVPEPVSCAGYLTKQGHKRKSWKKRYFILRGHT--ISYY-SDYDMANNAKGKPLAEVMVE  6764


Query  65    SIDKHayvaggmgavgaQEKPFGFKMVGHAPKKGYTELDIFVETLADLTKWLEVAHNALE  124
              + K               +PFGF  + +     Y    ++ +   + +KW+   +  ++
Sbjct  6765  DVQKWDG------------EPFGFMFMTNEQVPYY----VYADNDRERSKWMNALNKLMQ  6896


Query  125   -SAAAMSRKAAG  135
                +  SRK+A 
Sbjct  6897  WRRSPRSRKSAA  6932


 Score = 44.7 bits (104),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 21/54 (39%), Positives = 34/54 (63%), Gaps = 2/54 (4%)
 Frame = +3


Query  13    SCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSI  66
             SCEGY+TKRGH   S R+ Y VL+G  LR  ++  + A+++  ++  E  + S+
Sbjct  6312  SCEGYLTKRGHLVPSQRMAYYVLNGTSLR--HYADQQAYRDNQSAMAEVEIRSV  6467


 Score = 40.4 bits (93),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +3


Query  14    CEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKT  49
             CEGY+TKRGH   +W+ RY  L G  L     E K+
Sbjct  6030  CEGYLTKRGHLFTNWKTRYFTLRGNVLEYYSSEEKS  6137


>HYAP:HYAP_00251:HYAP_00252:scaffold_1:1195367:1195613
Length=246


 Score = 38.5 bits (88),  Expect = 0.006, Method: Composition-based stats.
 Identities = 13/23 (57%), Positives = 19/23 (83%), Gaps = 0/23 (0%)
 Frame = +2


Query  15  EGYVTKRGHFRKSWRVRYLVLDG  37
           EGYVTKRGH  ++W++R+  L+G
Sbjct  11  EGYVTKRGHLVRNWKMRFFTLEG  79


>APIN:H310_04844:H310_04845:scaffold_8:304741:307940
Length=3199


 Score = 41.2 bits (95),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 29/52 (56%), Gaps = 2/52 (4%)
 Frame = -1


Query  15    EGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSI  66
             EGYV K+G +   W  RYLVLDGA L   Y+ SK   + G   +G   ++ +
Sbjct  2650  EGYVRKKGDWLPRWEERYLVLDGASL--TYYNSKEEARTGKNLRGRMIITRV  2501


>PHCA:PHYCA_506484:PHYCA_111309:scaffold_20:128465:130467
Length=2002


 Score = 40.4 bits (93),  Expect = 0.019, Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 57/143 (40%), Gaps = 24/143 (17%)
 Frame = -2


Query  15    EGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSIDKHayvag  74
             EGYV K+G +   W  RYL+LDGA L   Y+ SK   ++    +G   +S +    Y   
Sbjct  1611  EGYVRKKGDWLPRWEERYLILDGATL--TYYNSKEEARSARNLRGRMIISKVRPENYG--  1444


Query  75    gmgavgaQEKPFGFKMVGHAPKKGYTELDIFVETLADLTKWLEVAHNALESAAAMSRKAA  134
                      K  GF +      +G+    +   T  +   W+E+   A+E       +  
Sbjct  1443  ---------KAHGFLL----ETQGHKHFHLCCSTELEKDMWVEMMQAAIE-------EGV  1324


Query  135   GDGGGSATTKSLFGFSTTTSPQQ  157
               G  S + + +      TSP Q
Sbjct  1323  RHGHSSISAEGMEALQMQTSPTQ  1255


>PHKE:PHYKE_2539:PHYKE_4609:scaffold_206:3712:9527
Length=5815


 Score = 38.9 bits (89),  Expect = 0.070, Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (66%), Gaps = 1/38 (3%)
 Frame = -2


Query  13    SCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTA  50
             S  G++ KRGH RK+W+ RY VL+ + LR  Y +S  A
Sbjct  1899  SMSGWLRKRGHVRKNWKARYFVLEKSVLRY-YTDSSCA  1789


>PYIR:PYIR_13555:PYIR_13563:scaffold_12:81537:90108
Length=8571


 Score = 35.8 bits (81),  Expect = 0.56, Method: Compositional matrix adjust.
 Identities = 16/36 (44%), Positives = 23/36 (64%), Gaps = 2/36 (6%)
 Frame = -2


Query  14    CEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKT  49
             C G++ K G   K+W+ RY  L+G  LR  YF+S+T
Sbjct  5243  CSGWLNKEGGKIKTWKRRYFSLNGTTLR--YFKSET  5142


 Score = 32.3 bits (72),  Expect = 8.7, Method: Compositional matrix adjust.
 Identities = 13/33 (39%), Positives = 18/33 (55%), Gaps = 0/33 (0%)
 Frame = -2


Query  12    TSCEGYVTKRGHFRKSWRVRYLVLDGADLRVAY  44
             T+CEG++ K+G   K W+ RY  L    L   Y
Sbjct  6734  TTCEGWLLKQGRTSKQWKKRYFTLTNDLLEYRY  6636


>PHCA:PHYCA_548122:PHYCA_507454:scaffold_27:526448:531417
Length=4969


 Score = 34.7 bits (78),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 24/33 (73%), Gaps = 1/33 (3%)
 Frame = +2


Query  16    GYVTKRGHFRKSWRVRYLVLDGADLRVAYFESK  48
             G++TK+GH  KSW+ R+ VL  +D   AY+++K
Sbjct  1361  GWLTKQGHMWKSWKTRFFVL-FSDGTFAYYKNK  1456


>PYUU:PYU1_G006039:PYU1_G006038:scaffold_2028:685517:687356
Length=1839


 Score = 33.9 bits (76),  Expect = 2.3, Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 27/40 (68%), Gaps = 5/40 (13%)
 Frame = +1


Query  16    GYVTK--RGH-FRKSWRVRYLVLDGADLRVAYFESKTAFQ  52
             GY+ +  +GH F KSWR  Y VLD ++L    +ESK+A++
Sbjct  1402  GYLKRFEKGHLFSKSWRQYYYVLDHSELTC--YESKSAYE  1515


>PYAR:PYAR_19464:PYAR_19463:scaffold_995:5215:8663
Length=3448


 Score = 33.9 bits (76),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 19/56 (34%), Positives = 28/56 (50%), Gaps = 2/56 (4%)
 Frame = +3


Query  14    CEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSIDKH  69
             C G++ K+G   KSW+ R+  L G  LR  YF+++     G A+     L    KH
Sbjct  2649  CSGWLRKQGGHIKSWKERFFTLVGTTLR--YFKTENGPFIGGATIVHVLLIHTRKH  2810


 Score = 33.9 bits (76),  Expect = 2.6, Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 22/33 (67%), Gaps = 2/33 (6%)
 Frame = +3


Query  15    EGYVTKRGHFRKSWRVRYLVLDGADLRVAYFES  47
             +G++ K G   KSW+ RY VLDG   R+ Y+E+
Sbjct  1695  KGWLRKEGQRMKSWKRRYFVLDGT--RLHYYEN  1787


>PHCA:PHYCA_541391:PHYCA_5615:scaffold_6:1107992:1110273
Length=2281


 Score = 33.1 bits (74),  Expect = 4.3, Method: Compositional matrix adjust.
 Identities = 22/83 (27%), Positives = 36/83 (43%), Gaps = 13/83 (16%)
 Frame = -1


Query  10    RPTSCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAFQNGAASKGEFYLSSIDKH  69
             R  S EGY++K+     SW+  Y VL+   L  A++E++  F +     G   L  I+  
Sbjct  1933  RDISFEGYLSKKSDVLMSWKATYCVLEEDTL--AFYETREDFISNTKLIGRIQLQGIEDE  1760


Query  70    ayvaggmgavgaQEKPFGFKMVG  92
                           KP GF+++ 
Sbjct  1759  DMG-----------KPNGFRVIA  1724


>PHSO:PHYSO_354313:PHYSO_354314:scaffold_3:3933721:3935452
Length=1731


 Score = 32.7 bits (73),  Expect = 4.8, Method: Compositional matrix adjust.
 Identities = 13/32 (41%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
 Frame = -1


Query  16   GYVTKRGHFRKSWRVRYLVLDGADLRVAYFES  47
            GY+ K+G F KSWR R+ +L      + Y+ S
Sbjct  918  GYLVKQGSFWKSWRRRFFILRRDRPVLCYYTS  823


>PHCA:PHYCA_9865:PHYCA_535841:scaffold_42:346165:355477
Length=9312


 Score = 32.7 bits (73),  Expect = 6.0, Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
 Frame = -2


Query  5     GVNVVRPTS---------CEGYVTKRGHFRKSWRVRYLVLDGADL  40
              V+ V+PT+          EGY+ KRGH   S R RY VL G +L
Sbjct  3995  SVSPVKPTTEVAPDEAILMEGYLMKRGHKIPSMRKRYCVLIGNEL  3861


>PHKE:PHYKE_5585:PHYKE_5586:scaffold_223:50056:55850
Length=5794


 Score = 32.3 bits (72),  Expect = 7.4, Method: Compositional matrix adjust.
 Identities = 16/40 (40%), Positives = 21/40 (53%), Gaps = 0/40 (0%)
 Frame = +2


Query  1     MSGAGVNVVRPTSCEGYVTKRGHFRKSWRVRYLVLDGADL  40
             +   G ++      EGY+ KRGH   S R RY VL G +L
Sbjct  1625  IESVGTSMAESILMEGYLMKRGHRIPSMRKRYCVLIGNEL  1744


>PHCA:PHYCA_105082:PHYCA_504923:scaffold_10:479407:481346
Length=1939


 Score = 32.0 bits (71),  Expect = 8.3, Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 22/41 (54%), Gaps = 2/41 (5%)
 Frame = -2


Query  11    PTSCEGYVTKRGHFRKSWRVRYLVLDGADLRVAYFESKTAF  51
             P   +G   K+G +   W   YL LDG  LRV  FES++ F
Sbjct  1578  PIHWDGPARKKGDWLPRWDDVYLSLDGVTLRV--FESRSRF  1462


>PHKE:PHYKE_4908:PHYKE_4909:scaffold_269:9588:13003
Length=3415


 Score = 32.0 bits (71),  Expect = 8.4, Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
 Frame = +1


Query  16    GYVTKRGHFRKSWRVRYLVLDGADLRV  42
             G++ K+G+   SW++RY VLDG  L +
Sbjct  2296  GWLFKQGYRTTSWKLRYFVLDGNTLHL  2376


Lambda      K        H        a         alpha
   0.315    0.131    0.369    0.792     4.96 


Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 


Effective search space used: 30808227100


  Database: OGOB.intergenic.fasta
    Posted date:  Sep 16, 2018  4:46 PM
  Number of letters in database: 626,110,404
  Number of sequences in database:  274,424


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40