Note:

Full BLAST raw output including alignments follows below the summary table

Hit Name Hit Start Hit End HSP Length HSP Score HSP Significance
PHCA:PHYCA_34475:PHYCA_511415:scaffold_84:104867:105093414146790.25
PHRA:PHYRA_94820:PHYRA_77505:scaffold_25:77991:922383822398655785.7
TBLASTN 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Database: OGOB.intergenic.fasta
           274,424 sequences; 626,110,404 total letters


Query= PYAR_13581


Length=730
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value


PHCA:PHYCA_34475:PHYCA_511415:scaffold_84:104867:105093               35.0    0.25 
PHRA:PHYRA_94820:PHYRA_77505:scaffold_25:77991:92238                  34.7    5.7  


>PHCA:PHYCA_34475:PHYCA_511415:scaffold_84:104867:105093
Length=226


 Score = 35.0 bits (79),  Expect = 0.25, Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 26/46 (57%), Gaps = 7/46 (15%)
 Frame = +1


Query  638  AMQYLRTAFEVLAREVGSSTPSS-------DGNFGDVLALLRHRVG  676
            A+ +LRTA EV+ REVG++   S        GNF  VL+ +R   G
Sbjct  4    ALAFLRTALEVIGREVGATIEMSSSTSRPVSGNFAHVLSAVRAATG  141


>PHRA:PHYRA_94820:PHYRA_77505:scaffold_25:77991:92238
Length=14247


 Score = 34.7 bits (78),  Expect = 5.7, Method: Compositional matrix adjust.
 Identities = 19/55 (35%), Positives = 28/55 (51%), Gaps = 2/55 (4%)
 Frame = -2


Query  625   CRRRGVCFDVTRRAMQYLRTAFEVLAREVGS--STPSSDGNFGDVLALLRHRVGV  677
             C +   C D  RRA Q L   + ++ R VGS  S    DGN   ++ L+ +R G+
Sbjct  3986  CSKHNCCVDSARRATQVLAAKYLIMRRYVGSRGSCCRQDGNSHVIIRLVMYRCGL  3822


Lambda      K        H        a         alpha
   0.322    0.133    0.395    0.792     4.96 


Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 


Effective search space used: 104832526860


  Database: OGOB.intergenic.fasta
    Posted date:  Sep 16, 2018  4:46 PM
  Number of letters in database: 626,110,404
  Number of sequences in database:  274,424


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40