TBLASTN 2.12.0+

Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.

Database: OGOB.intergenic.fasta
           274,424 sequences; 626,110,404 total letters

Query= PHYSO_296552

Length=135
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

PHCA:PHYCA_504703:PHYCA_504706:scaffold_9:509317:514737               149     2e-41
PYAP:PYAP_20399:PYAP_20400:scaffold_351:4434:9231                     50.4    7e-07
PHSO:PHYSO_419101:PHYSO_313570:scaffold_3:6495693:6501750             34.7    0.22 
PHIF:PITG_11279:PITG_11282:NW_003303740.1:2161229:2196581             30.4    6.8  
PHIF:PITG_20011:PITG_20012:NW_003303636.1:144044:144551               29.6    8.0  
SAPA:SPRG_07626:SPRG_20431:scaffold_32:99884:107782                   30.0    9.2  

>PHCA:PHYCA_504703:PHYCA_504706:scaffold_9:509317:514737
Length=5420

 Score = 149 bits (376),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 91/116 (78%), Gaps = 8/116 (7%)
 Frame = +2

Query  20    RIAVLSPGTVSDCSATSDEDILAEIWAMRSPRLDGASGDDLPEVDDEL-SETAPMEFLFF  78
             +I++LS  TVSDC+ TSD++ILAEIWA R   L     D+LPE+D EL  ET P EFLFF
Sbjct  2798  QISLLSV-TVSDCNGTSDQEILAEIWATRPSSL---GHDELPEIDAELVDETRPTEFLFF  2965

Query  79    SGCPDDKNLRVLDVGYRRLRSNPRATRYPVTPSYATSVPIKPTLVSNMPPLFAPRF  134
             +GCPDDKNLR LDVGYRRLRSNP    Y  TPSYAT+VP+KPTLV++MPPLF PRF
Sbjct  2966  TGCPDDKNLRELDVGYRRLRSNP---GYRATPSYATTVPVKPTLVTDMPPLFMPRF  3124

>PYAP:PYAP_20399:PYAP_20400:scaffold_351:4434:9231
Length=4797

 Score = 50.4 bits (119),  Expect = 7e-07, Method: Compositional matrix adjust.
 Identities = 30/62 (48%), Positives = 39/62 (63%), Gaps = 4/62 (6%)
 Frame = -2

Query  73    MEFLFFSGCPDD--KNLRVLDVGYRRLRSNPRATRYPVTPSYATSVPIKPTLVSNMPPLF  130
             MEFLFF G  D+   + R +    RR R++  A R PV PS   S+P+KPTLV N+PP+F
Sbjct  3296  MEFLFFGGSSDESVHSKREIGADLRRHRAHFMAQR-PV-PSCTRSIPVKPTLVRNLPPVF  3123

Query  131   AP  132
              P
Sbjct  3122  EP  3117

>PHSO:PHYSO_419101:PHYSO_313570:scaffold_3:6495693:6501750
Length=6057

 Score = 34.7 bits (78),  Expect = 0.22, Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (57%), Gaps = 2/51 (4%)
 Frame = +2

Query  76    LFFSGCPDDKNLRVLDVGYRRLRSNPRATRYPVTPSYATSVPIKPTLVSNM  126
             L   GC DD+  RV+D+  R+L S  RA R   +P + +   I P+ +SNM
Sbjct  4331  LVLRGCVDDRKYRVIDL--RQLLSGERAGRAT*SPDWQSRPFILPSSLSNM  4477

>PHIF:PITG_11279:PITG_11282:NW_003303740.1:2161229:2196581
Length=35352

 Score = 30.4 bits (67),  Expect = 6.8, Method: Compositional matrix adjust.
 Identities = 16/54 (30%), Positives = 26/54 (48%), Gaps = 3/54 (6%)
 Frame = +2

Query  2      KKLVNNVDISATNRGGSGRIAVLSPGTVSD---CSATSDEDILAEIWAMRSPRL  52
              K  V  + +S  + GG   + ++ P    +    S+ SDED+L E+   R  RL
Sbjct  17669  KMTVETLHVSLKSGGGGAEMVLIRPEITREDLKSSSVSDEDVLEELIKQRQARL  17830

>PHIF:PITG_20011:PITG_20012:NW_003303636.1:144044:144551
Length=507

 Score = 29.6 bits (65),  Expect = 8.0, Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (62%), Gaps = 1/42 (2%)
 Frame = -2

Query  95   RRLRSNPRATRYPVT-PSYATSVPIKPTLVSNMPPLFAPRFG  135
            R LRS+P + R P++ P Y  ++P  P + S++ P F  RFG
Sbjct  236  RSLRSSPWSLRSPLSSPPYWPALPSPPAVFSSVEPAFGLRFG  111

>SAPA:SPRG_07626:SPRG_20431:scaffold_32:99884:107782
Length=7898

 Score = 30.0 bits (66),  Expect = 9.2, Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 22/34 (65%), Gaps = 0/34 (0%)
 Frame = -1

Query  85    KNLRVLDVGYRRLRSNPRATRYPVTPSYATSVPI  118
             K L VLDV   R+   P  + +P++P++A +VP+
Sbjct  1115  KRLVVLDVKSWRVFVLPATSMHPISPAFAAAVPL  1014

Lambda      K        H        a         alpha
   0.316    0.135    0.401    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 5208821196

  Database: OGOB.intergenic.fasta
    Posted date:  Sep 16, 2018  4:46 PM
  Number of letters in database: 626,110,404
  Number of sequences in database:  274,424

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40