Full BLAST raw output including alignments follows below the summary table
| Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
| PYAR:PYAR_13570:PYAR_13569:scaffold_29:17128:18342 | 204 | 410 | 71 | 92 | 0.002 |
| PHIF:PITG_10665:PITG_10666:NW_003303739.1:505215:505480 | 73 | 207 | 45 | 62 | 7.9 |
TBLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB.intergenic.fasta
274,424 sequences; 626,110,404 total letters
Query= CCI44820
Length=123
Score E
Sequences producing significant alignments: (Bits) Value
PYAR:PYAR_13570:PYAR_13569:scaffold_29:17128:18342 40.0 0.002
PHIF:PITG_10665:PITG_10666:NW_003303739.1:505215:505480 28.5 7.9
>PYAR:PYAR_13570:PYAR_13569:scaffold_29:17128:18342
Length=1214
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (48%), Gaps = 25/71 (35%)
Frame = -1
Query 29 TLLNIRAEFRKHRDIRDPI-----------------------QLAQLLERAQSTIGYLKI 65
TL IR+EFR D+ DP +A L+ RAQS IGYLKI
Sbjct 410 TLQQIRSEFRSSGDLSDPKACVLILFPPALLGVPLTIGGALRSVAALVLRAQSKIGYLKI 231
Query 66 VTPHKRSDSGV 76
VTP R+ SG+
Sbjct 230 VTP--RATSGM 204
>PHIF:PITG_10665:PITG_10666:NW_003303739.1:505215:505480
Length=265
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/45 (29%), Positives = 23/45 (51%), Gaps = 0/45 (0%)
Frame = +1
Query 77 KHFVYKDGERIEKSLQAGEKAKFKVQDMEEGLKRHNQLIRRQYFM 121
KHFV G + +Q E+ V ++ GL +HN + ++F+
Sbjct 73 KHFVRATGCKFRFVVQMVEEGCVWVLRVQNGLYQHNHAVATEHFL 207
Lambda K H a alpha
0.321 0.135 0.370 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5113729264
Database: OGOB.intergenic.fasta
Posted date: Sep 16, 2018 4:46 PM
Number of letters in database: 626,110,404
Number of sequences in database: 274,424
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40