Full BLAST raw output including alignments follows below the summary table
| Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
| PHIF:NW_003303758.1 | 217133 | 217720 | 196 | 547 | 1e-63 |
| PHPA:scaffold_60 | 168866 | 169453 | 196 | 513 | 4e-59 |
| PHCA:scaffold_9 | 514911 | 515495 | 195 | 486 | 2e-55 |
| PHSO:scaffold_2 | 5421444 | 5421725 | 94 | 365 | 4e-39 |
| PHKE:scaffold_311 | 13590 | 13811 | 74 | 327 | 5e-34 |
| PLHA:NW_020187445.1 | 1036885 | 1037451 | 192 | 310 | 8e-32 |
| HYAP:scaffold_7 | 505220 | 505441 | 74 | 261 | 3e-25 |
| PYVX:scaffold_107 | 44022 | 44216 | 65 | 202 | 3e-17 |
| PYIR:scaffold_690 | 2028 | 2222 | 65 | 164 | 4e-12 |
| PYUU:scaffold_2006 | 815415 | 815612 | 66 | 153 | 1e-10 |
| PYIW:scaffold_2169 | 2801 | 2941 | 47 | 115 | 1e-05 |
| PYAP:scaffold_351 | 5697 | 5849 | 51 | 76 | 1.3 |
| PYIW:scaffold_784 | 4762 | 4932 | 57 | 70 | 8.4 |
TBLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB_genomes.fna
64,241 sequences; 1,297,559,224 total letters
Query= PITG_00011
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen... 215 1e-63
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ... 202 4e-59
PHCA:scaffold_9 PHYCAscaffold_9 191 2e-55
PHSO:scaffold_2 145 4e-39
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy... 130 5e-34
PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:... 124 8e-32
HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:... 105 3e-25
PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pv... 82.4 3e-17
PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pi... 67.8 4e-12
PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:p... 63.5 1e-10
PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:... 48.9 1e-05
PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:p... 33.9 1.3
PYIW:scaffold_784 piw_scaffold_784 dna:supercontig supercontig:pi... 31.6 8.4
>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1
genomic scaffold, whole genome shotgun sequence
Length=6928287
Score = 215 bits (547), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/196 (82%), Positives = 160/196 (82%), Gaps = 36/196 (18%)
Frame = +2
Query 1 MRAIGGLFKRKCsdaddatapsdseasqrrtsrwsrwshshrGSLPEAPLDVAAVAAPET 60
MRAIGGLFKRKCSDADDATAPSDSEASQRRTSRWSRWSHSHRGSLPEAPLDVAAVAAPET
Sbjct 217133 MRAIGGLFKRKCSDADDATAPSDSEASQRRTSRWSRWSHSHRGSLPEAPLDVAAVAAPET 217312
Query 61 APIQENDS------------------------------------TKQSPTDPsdlllads 84
APIQENDS TKQSPTDPSDLLLADS
Sbjct 217313 APIQENDSVATSPHTEESPAKKAKKAKVEHPKPEKKANPLPFNKTKQSPTDPSDLLLADS 217492
Query 85 sdESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVE 144
SDESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVE
Sbjct 217493 SDESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVE 217672
Query 145 NMRRSSILPDPKEYEF 160
NMRRSSILPDPKEYEF
Sbjct 217673 NMRRSSILPDPKEYEF 217720
>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.60, whole genome shotgun
sequence
Length=386225
Score = 202 bits (513), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/196 (76%), Positives = 154/196 (79%), Gaps = 36/196 (18%)
Frame = -2
Query 1 MRAIGGLFKRKCsdaddatapsdseasqrrtsrwsrwshshrGSLPEAPLDVAAVAAPET 60
MRAIGGLFKRK SD DDA PSDSEASQRRTSRWSRWSHSHRGS PEAPL+VAAVAAPET
Sbjct 169453 MRAIGGLFKRKASDVDDAMEPSDSEASQRRTSRWSRWSHSHRGSFPEAPLEVAAVAAPET 169274
Query 61 APIQENDS------------------------------------TKQSPTDPsdlllads 84
APIQEN+S TKQSPTDPS+LL+ADS
Sbjct 169273 APIQENESAASSPHPDEPPAKKVKKATVEHPTTEKKASPLSFNKTKQSPTDPSELLMADS 169094
Query 85 sdESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVE 144
SDESGAEPQRVSFLFFGGSD DSTFQPELRPSELDDLH+NDIRPSLQAKMPLFFSPPLVE
Sbjct 169093 SDESGAEPQRVSFLFFGGSDVDSTFQPELRPSELDDLHENDIRPSLQAKMPLFFSPPLVE 168914
Query 145 NMRRSSILPDPKEYEF 160
+MRRSSILPDPKEYEF
Sbjct 168913 HMRRSSILPDPKEYEF 168866
>PHCA:scaffold_9 PHYCAscaffold_9
Length=1114135
Score = 191 bits (486), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/195 (72%), Positives = 151/195 (77%), Gaps = 35/195 (18%)
Frame = +3
Query 1 MRAIGGLFKRKCsdaddatapsdseasqrrtsrwsrwshshrGSLPEAPLDVAAVAAPET 60
MRAIGGLFKRK SDADDATAPSDSEASQRRTSRWSRWSHS+RGS+PEAPL+VAAVA PET
Sbjct 514911 MRAIGGLFKRKSSDADDATAPSDSEASQRRTSRWSRWSHSNRGSMPEAPLEVAAVAEPET 515090
Query 61 APIQENDS-----------------------------------TKQSPTDPsdllladss 85
APIQEN+S TKQSPTDPS L+ + SS
Sbjct 515091 APIQENESVASSPHMEEPPAKKVKKVKAEKPKKEAKIKPPSFNTKQSPTDPSALVASGSS 515270
Query 86 dESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVEN 145
D S EPQR+SFLFFGGSDTDSTFQPELRPSE D+LH+NDIRPSLQAKMPLFFSPP+VEN
Sbjct 515271 DGSVVEPQRISFLFFGGSDTDSTFQPELRPSEYDELHENDIRPSLQAKMPLFFSPPMVEN 515450
Query 146 MRRSSILPDPKEYEF 160
MRRSSILPDPKEYEF
Sbjct 515451 MRRSSILPDPKEYEF 515495
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 26/67 (39%)
Frame = +3
Query 93 QRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIR-------------------PSLQAK 133
++V FLF+GGSD + P+ + LHQN R P + +
Sbjct 517011 RQVQFLFYGGSDPPT-------PNSVGGLHQNGYRSDMISNYVEPMSPAASIESPRISHE 517169
Query 134 MPLFFSP 140
MP FFSP
Sbjct 517170 MPCFFSP 517190
>PHSO:scaffold_2
Length=11587142
Score = 145 bits (365), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/94 (84%), Positives = 81/94 (86%), Gaps = 2/94 (2%)
Frame = +3
Query 69 TKQSPTDPsdl--lladssdESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDI 126
KQSPTDPS L DS DE AEP RVSFLFFGGSD DSTFQPELRPSELDDLH+N+I
Sbjct 5421444 VKQSPTDPSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEI 5421623
Query 127 RPSLQAKMPLFFSPPLVENMRRSSILPDPKEYEF 160
RPSLQ KMPLFFSPPLVENMRRSSILPDPKEYEF
Sbjct 5421624 RPSLQVKMPLFFSPPLVENMRRSSILPDPKEYEF 5421725
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/68 (79%), Positives = 57/68 (84%), Gaps = 1/68 (1%)
Frame = +3
Query 1 MRAIGGLFKRKCsdaddatapsdseasqr-rtsrwsrwshshrGSLPEAPLDVAAVAAPE 59
MRAIGGLFKRK DADD APSDSEASQR TSRWSRWS SHR SLPEAP++V AVA PE
Sbjct 5420919 MRAIGGLFKRKSIDADDPMAPSDSEASQRPSTSRWSRWSQSHRQSLPEAPMEVTAVAVPE 5421098
Query 60 TAPIQEND 67
APIQEN+
Sbjct 5421099 AAPIQENE 5421122
>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1
REF
Length=43504
Score = 130 bits (327), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 69/74 (93%), Gaps = 0/74 (0%)
Frame = -3
Query 87 ESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVENM 146
E GAEP R+SFLFFGGSD +STF P+LRPS+LDDLH+ND+RPSLQAKMP FFSPP+VE+M
Sbjct 13811 EYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMPQFFSPPVVEHM 13632
Query 147 RRSSILPDPKEYEF 160
RRSSILPDP+EYEF
Sbjct 13631 RRSSILPDPREYEF 13590
>PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:
Scaffold_525, whole genome shotgun sequence
Length=2102221
Score = 124 bits (310), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/192 (57%), Positives = 121/192 (63%), Gaps = 35/192 (18%)
Frame = +1
Query 1 MRAIGGLFKRKCsdaddatapsdseasqrrtsrwsrwshshrGSLPEAPLDVAAVAAPET 60
MRAIGG F+R CSDAD T P DSE+SQRRTSRWS S+PEAP V ET
Sbjct 1036885 MRAIGGFFRRNCSDADSDTRPHDSESSQRRTSRWSHSHRQ---SMPEAPSTVVVQEILET 1037055
Query 61 APIQ---ENDS-----------------------------TKQSPTDPsdllladssdES 88
Q EN+ T+QSPT+ S++L A DE
Sbjct 1037056 TRSQNAAENEPLTKSPHTEEPPVKKVKKDKPKKAKNTPSPTEQSPTETSEMLSATLVDEL 1037235
Query 89 GAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVENMRR 148
G E QRVSFLFFGGSD D TFQPELRPSELDDLH+NDIRPSLQAKMPLF PPL +N+RR
Sbjct 1037236 GVELQRVSFLFFGGSDVDCTFQPELRPSELDDLHENDIRPSLQAKMPLFLPPPLPKNVRR 1037415
Query 149 SSILPDPKEYEF 160
SSILPDP+EYEF
Sbjct 1037416 SSILPDPEEYEF 1037451
>HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:1:905110:1
REF
Length=905110
Score = 105 bits (261), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/74 (68%), Positives = 57/74 (77%), Gaps = 0/74 (0%)
Frame = +2
Query 87 ESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVENM 146
ES +P RVSFL FGGS+ DSTF+PEL PSE DD+H ++IRP LQ KMPLFFS PL E +
Sbjct 505220 ESNVDPLRVSFLIFGGSEVDSTFEPELHPSEYDDVHGSEIRPVLQNKMPLFFSLPLAERL 505399
Query 147 RRSSILPDPKEYEF 160
RRSS DPKEYE
Sbjct 505400 RRSSAKSDPKEYEL 505441
>PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_107:1:52321:1
REF
Length=52321
Score = 82.4 bits (202), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (2%)
Frame = +3
Query 97 FLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVENMRRSSIL-PDP 155
FLF+GGSD D F+P+LRPS LD + + IRP ++ MP+FFS P EN+RRSSIL DP
Sbjct 44022 FLFYGGSDVDGAFKPDLRPSHLDLVQPSAIRPVVKQHMPVFFSAPQYENLRRSSILGADP 44201
Query 156 KEYEF 160
+EYEF
Sbjct 44202 REYEF 44216
>PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_690:1:17839:1
REF
Length=17839
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (74%), Gaps = 1/65 (2%)
Frame = -3
Query 97 FLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVE-NMRRSSILPDP 155
FLF+ GS D++F+PE S + ++ N IRPSL+ +MP+FFSPP + ++RRSSIL DP
Sbjct 2222 FLFYPGSAEDNSFKPEKVHSTVVEIDYNAIRPSLKLEMPVFFSPPKEQTSLRRSSILTDP 2043
Query 156 KEYEF 160
+EYE
Sbjct 2042 REYEL 2028
>PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:pug:scf1117875582006:1:1270039:1
REF
Length=1270039
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (52%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = -3
Query 97 FLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPPLVENM--RRSSILPD 154
FLF+ GS D++F+PE S + ++ N IRPSL +MP+FFSPP + RRSSIL D
Sbjct 815612 FLFYPGSAEDNSFKPEKVTSSIVEIDYNAIRPSLTLQMPVFFSPPTEPSNFPRRSSILTD 815433
Query 155 PKEYEF 160
P+EYE
Sbjct 815432 PREYEL 815415
>PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_2169:1:5775:1
REF
Length=5775
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Frame = -3
Query 94 RVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSP 140
R F F+ GS D++F+PE S + ++ N IRPSL +MP+FFSP
Sbjct 2941 RYQFHFYSGSAEDNSFKPERVHSTVAEIDYNTIRPSLTLQMPVFFSP 2801
>PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:pag1_scaffolds_v1:pag1_scaffold_351:1:31055:1
REF
Length=31055
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (61%), Gaps = 6/51 (12%)
Frame = -1
Query 97 FLFFGGSDTDS----TFQPELRPSELDDLHQNDIRPSL--QAKMPLFFSPP 141
++ F G++ +P+ +P DD+H +++RPSL ++P+FF+PP
Sbjct 5849 YVLFLGTERSGYKPDHLRPKYQPQNHDDVHLDELRPSLLEGRQLPVFFTPP 5697
>PYIW:scaffold_784 piw_scaffold_784 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_784:1:14159:1
REF
Length=14159
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 10/57 (18%)
Frame = +1
Query 93 QRVSFLFFGGSDTDSTFQPELRPSELDDL----------HQNDIRPSLQAKMPLFFS 139
+R FLFF GS++ P + + ++ H+ ++P + +MP+FFS
Sbjct 4762 ERPQFLFFCGSESTGMRTPSVSSARMNAAFQQQAAQQQAHETVVKPVISHRMPVFFS 4932
Lambda K H a alpha
0.314 0.133 0.389 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 19130941170
Database: OGOB_genomes.fna
Posted date: Sep 16, 2018 3:46 PM
Number of letters in database: 1,297,559,224
Number of sequences in database: 64,241
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40