Full BLAST raw output including alignments follows below the summary table
| Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
| PHSO:scaffold_2 | 5421432 | 5421725 | 98 | 509 | 2e-58 |
| PHPA:scaffold_60 | 168866 | 169453 | 199 | 460 | 8e-52 |
| PHIF:NW_003303758.1 | 217133 | 217720 | 199 | 460 | 8e-52 |
| PHCA:scaffold_9 | 514911 | 515495 | 198 | 439 | 5e-49 |
| PHKE:scaffold_311 | 13590 | 13850 | 87 | 335 | 5e-35 |
| PLHA:NW_020187445.1 | 1036885 | 1037451 | 192 | 327 | 6e-34 |
| HYAP:scaffold_7 | 505160 | 505441 | 94 | 293 | 3e-29 |
| PYVX:scaffold_107 | 44022 | 44216 | 65 | 206 | 9e-18 |
| PYIR:scaffold_690 | 2028 | 2258 | 79 | 169 | 1e-12 |
| PYUU:scaffold_2006 | 815418 | 815612 | 65 | 153 | 1e-10 |
| PYIW:scaffold_2169 | 2801 | 2941 | 47 | 117 | 7e-06 |
| PYAP:scaffold_351 | 5697 | 5849 | 51 | 78 | 1.1 |
TBLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB_genomes.fna
64,241 sequences; 1,297,559,224 total letters
Query= PHYSO_478253
Length=169
Score E
Sequences producing significant alignments: (Bits) Value
PHSO:scaffold_2 200 2e-58
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ... 181 8e-52
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen... 181 8e-52
PHCA:scaffold_9 PHYCAscaffold_9 173 5e-49
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy... 133 5e-35
PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:... 130 6e-34
HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:... 117 3e-29
PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pv... 84.0 9e-18
PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pi... 69.7 1e-12
PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:p... 63.5 1e-10
PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:... 49.7 7e-06
PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:p... 34.7 1.1
>PHSO:scaffold_2
Length=11587142
Score = 200 bits (509), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 96/98 (98%), Positives = 96/98 (98%), Gaps = 0/98 (0%)
Frame = +3
Query 72 PSSPVKQSPTDPSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLH 131
P PVKQSPTDPSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLH
Sbjct 5421432 PKQPVKQSPTDPSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLH 5421611
Query 132 ENEIRPSLQVKMPLFFSPPLVENMRRSSILPDPKEYEF 169
ENEIRPSLQVKMPLFFSPPLVENMRRSSILPDPKEYEF
Sbjct 5421612 ENEIRPSLQVKMPLFFSPPLVENMRRSSILPDPKEYEF 5421725
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/74 (100%), Positives = 74/74 (100%), Gaps = 0/74 (0%)
Frame = +3
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEAsqrpstsrwsrwsqshrqsLpeapmevtavavpe 60
MRAIGGLFKRKSIDADDPMAPSDSEASQRPSTSRWSRWSQSHRQSLPEAPMEVTAVAVPE
Sbjct 5420919 MRAIGGLFKRKSIDADDPMAPSDSEASQRPSTSRWSRWSQSHRQSLPEAPMEVTAVAVPE 5421098
Query 61 aapIQENEPPAPSS 74
AAPIQENEPPAPSS
Sbjct 5421099 AAPIQENEPPAPSS 5421140
>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.60, whole genome shotgun
sequence
Length=386225
Score = 181 bits (460), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 129/199 (65%), Positives = 138/199 (69%), Gaps = 33/199 (17%)
Frame = -2
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEAsqrpstsrwsrwsqshrqsLpeapmevtavavpe 60
MRAIGGLFKRK+ D DD M PSDSEASQR ++ PEAP+EV AVA PE
Sbjct 169453 MRAIGGLFKRKASDVDDAMEPSDSEASQRRTSRWSRWSHSHRGS-FPEAPLEVAAVAAPE 169277
Query 61 aapIQENE----------PPAP---------------SSPV-----KQSPTDPSALLLAG 90
APIQENE PPA +SP+ KQSPTDPS LL+A
Sbjct 169276 TAPIQENESAASSPHPDEPPAKKVKKATVEHPTTEKKASPLSFNKTKQSPTDPSELLMA- 169100
Query 91 VDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPP 150
DS DE AEP RVSFLFFGGSDVDSTFQPELRPSELDDLHEN+IRPSLQ KMPLFFSPP
Sbjct 169099 -DSSDESGAEPQRVSFLFFGGSDVDSTFQPELRPSELDDLHENDIRPSLQAKMPLFFSPP 168923
Query 151 LVENMRRSSILPDPKEYEF 169
LVE+MRRSSILPDPKEYEF
Sbjct 168922 LVEHMRRSSILPDPKEYEF 168866
>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1
genomic scaffold, whole genome shotgun sequence
Length=6928287
Score = 181 bits (460), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 134/199 (67%), Gaps = 33/199 (17%)
Frame = +2
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEAsqrpstsrwsrwsqshrqsLpeapmevtavavpe 60
MRAIGGLFKRK DADD APSDSEASQR ++ LPEAP++V AVA PE
Sbjct 217133 MRAIGGLFKRKCSDADDATAPSDSEASQRRTSRWSRWSHSHRGS-LPEAPLDVAAVAAPE 217309
Query 61 aapIQENEP------------------------------PAPSSPVKQSPTDPSALLLAG 90
APIQEN+ P P + KQSPTDPS LLLA
Sbjct 217310 TAPIQENDSVATSPHTEESPAKKAKKAKVEHPKPEKKANPLPFNKTKQSPTDPSDLLLA- 217486
Query 91 VDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPP 150
DS DE AEP RVSFLFFGGSD DSTFQPELRPSELDDLH+N+IRPSLQ KMPLFFSPP
Sbjct 217487 -DSSDESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRPSLQAKMPLFFSPP 217663
Query 151 LVENMRRSSILPDPKEYEF 169
LVENMRRSSILPDPKEYEF
Sbjct 217664 LVENMRRSSILPDPKEYEF 217720
>PHCA:scaffold_9 PHYCAscaffold_9
Length=1114135
Score = 173 bits (439), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/198 (62%), Positives = 133/198 (67%), Gaps = 32/198 (16%)
Frame = +3
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEAsqrpstsrwsrwsqshrqsLpeapmevtavavpe 60
MRAIGGLFKRKS DADD APSDSEASQR ++ + +PEAP+EV AVA PE
Sbjct 514911 MRAIGGLFKRKSSDADDATAPSDSEASQRRTSRWSRWSHSNRGS-MPEAPLEVAAVAEPE 515087
Query 61 aapIQENEPPA-----------------------------PSSPVKQSPTDPSALLLAGV 91
APIQENE A PS KQSPTDPSAL+ +G
Sbjct 515088 TAPIQENESVASSPHMEEPPAKKVKKVKAEKPKKEAKIKPPSFNTKQSPTDPSALVASG- 515264
Query 92 DSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPPL 151
S D EP R+SFLFFGGSD DSTFQPELRPSE D+LHEN+IRPSLQ KMPLFFSPP+
Sbjct 515265 -SSDGSVVEPQRISFLFFGGSDTDSTFQPELRPSEYDELHENDIRPSLQAKMPLFFSPPM 515441
Query 152 VENMRRSSILPDPKEYEF 169
VENMRRSSILPDPKEYEF
Sbjct 515442 VENMRRSSILPDPKEYEF 515495
>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1
REF
Length=43504
Score = 133 bits (335), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 65/87 (75%), Positives = 75/87 (86%), Gaps = 0/87 (0%)
Frame = -3
Query 83 PSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVK 142
P LL A +S DE AEPAR+SFLFFGGSD +STF P+LRPS+LDDLHEN++RPSLQ K
Sbjct 13850 PELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAK 13671
Query 143 MPLFFSPPLVENMRRSSILPDPKEYEF 169
MP FFSPP+VE+MRRSSILPDP+EYEF
Sbjct 13670 MPQFFSPPVVEHMRRSSILPDPREYEF 13590
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 22/26 (85%), Gaps = 0/26 (0%)
Frame = -3
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEA 26
+RAIGGLFKR+S DA+ APSDSE+
Sbjct 14189 IRAIGGLFKRRSSDANGLSAPSDSES 14112
>PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:
Scaffold_525, whole genome shotgun sequence
Length=2102221
Score = 130 bits (327), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 114/192 (59%), Gaps = 26/192 (14%)
Frame = +1
Query 1 MRAIGGLFKRKSIDADDPMAPSDSEAsqrpstsrwsrwsqshrqsLpeapmevtavavpe 60
MRAIGG F+R DAD P DSE+SQR ++ QS ++ P + +
Sbjct 1036885 MRAIGGFFRRNCSDADSDTRPHDSESSQRRTSRWSHSHRQSMPEA-PSTVVVQEILETTR 1037061
Query 61 aapIQENEPPAPS-----------------------SPVKQSPTDPSALLLAGVDSDDEM 97
+ ENEP S SP +QSPT+ S +L A + DE+
Sbjct 1037062 SQNAAENEPLTKSPHTEEPPVKKVKKDKPKKAKNTPSPTEQSPTETSEMLSATLV--DEL 1037235
Query 98 PAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPPLVENMRR 157
E RVSFLFFGGSDVD TFQPELRPSELDDLHEN+IRPSLQ KMPLF PPL +N+RR
Sbjct 1037236 GVELQRVSFLFFGGSDVDCTFQPELRPSELDDLHENDIRPSLQAKMPLFLPPPLPKNVRR 1037415
Query 158 SSILPDPKEYEF 169
SSILPDP+EYEF
Sbjct 1037416 SSILPDPEEYEF 1037451
>HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:1:905110:1
REF
Length=905110
Score = 117 bits (293), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/94 (65%), Positives = 68/94 (72%), Gaps = 0/94 (0%)
Frame = +2
Query 76 VKQSPTDPSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEI 135
K SPTD S LL A S +E +P RVSFL FGGS+VDSTF+PEL PSE DD+H +EI
Sbjct 505160 AKPSPTDSSELLRAESSSGNESNVDPLRVSFLIFGGSEVDSTFEPELHPSEYDDVHGSEI 505339
Query 136 RPSLQVKMPLFFSPPLVENMRRSSILPDPKEYEF 169
RP LQ KMPLFFS PL E +RRSS DPKEYE
Sbjct 505340 RPVLQNKMPLFFSLPLAERLRRSSAKSDPKEYEL 505441
>PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_107:1:52321:1
REF
Length=52321
Score = 84.0 bits (206), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/65 (62%), Positives = 50/65 (77%), Gaps = 1/65 (2%)
Frame = +3
Query 106 FLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPPLVENMRRSSIL-PDP 164
FLF+GGSDVD F+P+LRPS LD + + IRP ++ MP+FFS P EN+RRSSIL DP
Sbjct 44022 FLFYGGSDVDGAFKPDLRPSHLDLVQPSAIRPVVKQHMPVFFSAPQYENLRRSSILGADP 44201
Query 165 KEYEF 169
+EYEF
Sbjct 44202 REYEF 44216
>PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_690:1:17839:1
REF
Length=17839
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (70%), Gaps = 3/79 (4%)
Frame = -3
Query 92 DSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPPL 151
DSDD+ + FLF+ GS D++F+PE S + ++ N IRPSL+++MP+FFSPP
Sbjct 2258 DSDDD--GNSYQYQFLFYPGSAEDNSFKPEKVHSTVVEIDYNAIRPSLKLEMPVFFSPPK 2085
Query 152 VE-NMRRSSILPDPKEYEF 169
+ ++RRSSIL DP+EYE
Sbjct 2084 EQTSLRRSSILTDPREYEL 2028
>PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:pug:scf1117875582006:1:1270039:1
REF
Length=1270039
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/65 (54%), Positives = 46/65 (71%), Gaps = 2/65 (3%)
Frame = -3
Query 106 FLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSPPLV-ENM-RRSSILPD 163
FLF+ GS D++F+PE S + ++ N IRPSL ++MP+FFSPP N RRSSIL D
Sbjct 815612 FLFYPGSAEDNSFKPEKVTSSIVEIDYNAIRPSLTLQMPVFFSPPTEPSNFPRRSSILTD 815433
Query 164 PKEYE 168
P+EYE
Sbjct 815432 PREYE 815418
>PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_2169:1:5775:1
REF
Length=5775
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/47 (47%), Positives = 32/47 (68%), Gaps = 0/47 (0%)
Frame = -3
Query 103 RVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVKMPLFFSP 149
R F F+ GS D++F+PE S + ++ N IRPSL ++MP+FFSP
Sbjct 2941 RYQFHFYSGSAEDNSFKPERVHSTVAEIDYNTIRPSLTLQMPVFFSP 2801
>PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:pag1_scaffolds_v1:pag1_scaffold_351:1:31055:1
REF
Length=31055
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (61%), Gaps = 6/51 (12%)
Frame = -1
Query 106 FLFFGGSDVDS----TFQPELRPSELDDLHENEIRPSL--QVKMPLFFSPP 150
++ F G++ +P+ +P DD+H +E+RPSL ++P+FF+PP
Sbjct 5849 YVLFLGTERSGYKPDHLRPKYQPQNHDDVHLDELRPSLLEGRQLPVFFTPP 5697
Lambda K H a alpha
0.313 0.134 0.384 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 22528592605
Database: OGOB_genomes.fna
Posted date: Sep 16, 2018 3:46 PM
Number of letters in database: 1,297,559,224
Number of sequences in database: 64,241
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40