Full BLAST raw output including alignments follows below the summary table
| Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
| PHKE:scaffold_311 | 13590 | 14252 | 221 | 700 | 3e-83 |
| PHIF:NW_003303758.1 | 217106 | 217720 | 212 | 410 | 3e-44 |
| PHPA:scaffold_60 | 168866 | 169504 | 219 | 392 | 7e-42 |
| PHCA:scaffold_9 | 514884 | 515495 | 212 | 357 | 4e-37 |
| PHSO:scaffold_2 | 5421465 | 5421725 | 87 | 339 | 1e-34 |
| PLHA:NW_020187445.1 | 1037191 | 1037451 | 90 | 259 | 5e-24 |
| HYAP:scaffold_7 | 505175 | 505441 | 90 | 249 | 1e-22 |
| PYVX:scaffold_107 | 44022 | 44216 | 65 | 185 | 3e-14 |
| PYIR:scaffold_690 | 2028 | 2231 | 68 | 148 | 2e-09 |
| PYUU:scaffold_2006 | 815415 | 815612 | 66 | 141 | 2e-08 |
| PYIW:scaffold_2169 | 2801 | 2941 | 47 | 98 | 0.006 |
| PYAP:scaffold_351 | 5661 | 5849 | 67 | 76 | 2.7 |
| PLHA:NW_020187244.1 | 1773426 | 1773668 | 87 | 75 | 4.2 |
TBLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB_genomes.fna
64,241 sequences; 1,297,559,224 total letters
Query= PHYKE_5720
Length=221
Score E
Sequences producing significant alignments: (Bits) Value
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy... 274 3e-83
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen... 162 3e-44
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ... 155 7e-42
PHCA:scaffold_9 PHYCAscaffold_9 142 4e-37
PHSO:scaffold_2 135 1e-34
PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:... 104 5e-24
HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:... 100 1e-22
PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pv... 75.9 3e-14
PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pi... 61.6 2e-09
PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:p... 58.9 2e-08
PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:... 42.4 0.006
PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:p... 33.9 2.7
PLHA:NW_020187244.1 Plasmopara halstedii genome assembly, contig:... 33.5 4.2
>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1
REF
Length=43504
Score = 274 bits (700), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 221/221 (100%), Positives = 221/221 (100%), Gaps = 0/221 (0%)
Frame = -3
Query 1 METRVRPSVSEPTKRRHSGGFIRAIGGLFKRRSSDANGLSAPsdsessqrstsrwsrfsL 60
METRVRPSVSEPTKRRHSGGFIRAIGGLFKRRSSDANGLSAPSDSESSQRSTSRWSRFSL
Sbjct 14252 METRVRPSVSEPTKRRHSGGFIRAIGGLFKRRSSDANGLSAPSDSESSQRSTSRWSRFSL 14073
Query 61 RHSLpeapmeveavaapeaapIRENDSVSTpspsphpeeppakkakkaekpkkekkekkp 120
RHSLPEAPMEVEAVAAPEAAPIRENDSVSTPSPSPHPEEPPAKKAKKAEKPKKEKKEKKP
Sbjct 14072 RHSLPEAPMEVEAVAAPEAAPIRENDSVSTPSPSPHPEEPPAKKAKKAEKPKKEKKEKKP 13893
Query 121 kppsqkskpspTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLD 180
KPPSQKSKPSPTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLD
Sbjct 13892 KPPSQKSKPSPTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLD 13713
Query 181 DLHENDLRPSLQAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
DLHENDLRPSLQAKMPQFFSPPVVEHMRRSSILPDPREYEF
Sbjct 13712 DLHENDLRPSLQAKMPQFFSPPVVEHMRRSSILPDPREYEF 13590
>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1
genomic scaffold, whole genome shotgun sequence
Length=6928287
Score = 162 bits (410), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 171/212 (81%), Gaps = 9/212 (4%)
Frame = +2
Query 12 PTKRRHSGGFIRAIGGLFKRRSSDANGLSAPsdsessqrstsrwsrfsLRH--SLpeapm 69
P KRRHSG +RAIGGLFKR+ SDA+ +APSDSE+SQR TSRWSR+S H SLPEAP+
Sbjct 217106 PAKRRHSG-LMRAIGGLFKRKCSDADDATAPSDSEASQRRTSRWSRWSHSHRGSLPEAPL 217282
Query 70 eveavaapeaapIRENDSVSTpspsphpeeppakkakkaekpkkekkekkpkppsqkskp 129
+V AVAAPE API+ENDSV+T SPH EE PAKKAKKA+ + ++K P K+K
Sbjct 217283 DVAAVAAPETAPIQENDSVAT---SPHTEESPAKKAKKAKVEHPKPEKKANPLPFNKTKQ 217453
Query 130 spTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRP 189
SPTD +LLLA +S DE GAEP R+SFLFFGGSD +STF P+LRPS+LDDLH+ND+RP
Sbjct 217454 SPTDPSDLLLA---DSSDESGAEPQRVSFLFFGGSDTDSTFQPELRPSELDDLHQNDIRP 217624
Query 190 SLQAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
SLQAKMP FFSPP+VE+MRRSSILPDP+EYEF
Sbjct 217625 SLQAKMPLFFSPPLVENMRRSSILPDPKEYEF 217720
>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.60, whole genome shotgun
sequence
Length=386225
Score = 155 bits (392), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 127/219 (58%), Positives = 156/219 (71%), Gaps = 8/219 (4%)
Frame = -2
Query 5 VRPSVSEPTKRRHSGGFIRAIGGLFKRRSSDANGLSAPsdsessqrstsrwsrfsLRH-- 62
V + +EP +R + G +RAIGGLFKR++SD + PSDSE+SQR TSRWSR+S H
Sbjct 169504 VHAAAAEPPTKRKTRGIMRAIGGLFKRKASDVDDAMEPSDSEASQRRTSRWSRWSHSHRG 169325
Query 63 SLpeapmeveavaapeaapIRENDSVSTpspsphpeeppakkakkaekpkkekkekkpkp 122
S PEAP+EV AVAAPE API+EN+S ++ P KKA ++K
Sbjct 169324 SFPEAPLEVAAVAAPETAPIQENESAASSPHPDEPPAKKVKKATVEHPTTEKKASPLSFN 169145
Query 123 psqkskpspTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDL 182
+++S TD ELL+A +S DE GAEP R+SFLFFGGSD +STF P+LRPS+LDDL
Sbjct 169144 KTKQSP---TDPSELLMA---DSSDESGAEPQRVSFLFFGGSDVDSTFQPELRPSELDDL 168983
Query 183 HENDLRPSLQAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
HEND+RPSLQAKMP FFSPP+VEHMRRSSILPDP+EYEF
Sbjct 168982 HENDIRPSLQAKMPLFFSPPLVEHMRRSSILPDPKEYEF 168866
>PHCA:scaffold_9 PHYCAscaffold_9
Length=1114135
Score = 142 bits (357), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/212 (57%), Positives = 145/212 (68%), Gaps = 10/212 (5%)
Frame = +3
Query 12 PTKRRHSGGFIRAIGGLFKRRSSDANGLSAPsdsessq--rstsrwsrfsLRHSLpeapm 69
PTKR+H G +RAIGGLFKR+SSDA+ +APSDSE+SQ S S R S+PEAP+
Sbjct 514884 PTKRKHRG-LMRAIGGLFKRKSSDADDATAPSDSEASQRRTSRWSRWSHSNRGSMPEAPL 515060
Query 70 eveavaapeaapIRENDSVSTpspsphpeeppakkakkaekpkkekkekkpkppsqkskp 129
EV AVA PE API+EN+SV++ P KK K + K+ K + Q
Sbjct 515061 EVAAVAEPETAPIQENESVASSPHMEEPPAKKVKKVKAEKPKKEAKIKPPSFNTKQSP-- 515234
Query 130 spTDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRP 189
TD P L+A S S D EP R+SFLFFGGSD +STF P+LRPS+ D+LHEND+RP
Sbjct 515235 --TD-PSALVA--SGSSDGSVVEPQRISFLFFGGSDTDSTFQPELRPSEYDELHENDIRP 515399
Query 190 SLQAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
SLQAKMP FFSPP+VE+MRRSSILPDP+EYEF
Sbjct 515400 SLQAKMPLFFSPPMVENMRRSSILPDPKEYEF 515495
>PHSO:scaffold_2
Length=11587142
Score = 135 bits (339), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/87 (75%), Positives = 75/87 (86%), Gaps = 0/87 (0%)
Frame = +3
Query 135 PELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAK 194
P LL A +S DE AEPAR+SFLFFGGSD +STF P+LRPS+LDDLHEN++RPSLQ K
Sbjct 5421465 PSALLLAGVDSDDEMPAEPARVSFLFFGGSDVDSTFQPELRPSELDDLHENEIRPSLQVK 5421644
Query 195 MPQFFSPPVVEHMRRSSILPDPREYEF 221
MP FFSPP+VE+MRRSSILPDP+EYEF
Sbjct 5421645 MPLFFSPPLVENMRRSSILPDPKEYEF 5421725
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +3
Query 13 TKRRHSGGFIRAIGGLFKRRSSDANGLSAP 42
KR+H G +RAIGGLFKR+S DA+ AP
Sbjct 5420895 NKRKHRG-LMRAIGGLFKRKSIDADDPMAP 5420981
>PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:
Scaffold_525, whole genome shotgun sequence
Length=2102221
Score = 104 bits (259), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/90 (66%), Positives = 70/90 (78%), Gaps = 3/90 (3%)
Frame = +1
Query 132 TDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSL 191
T+T E+L A DE G E R+SFLFFGGSD + TF P+LRPS+LDDLHEND+RPSL
Sbjct 1037191 TETSEMLSAT---LVDELGVELQRVSFLFFGGSDVDCTFQPELRPSELDDLHENDIRPSL 1037361
Query 192 QAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
QAKMP F PP+ +++RRSSILPDP EYEF
Sbjct 1037362 QAKMPLFLPPPLPKNVRRSSILPDPEEYEF 1037451
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (58%), Gaps = 0/38 (0%)
Frame = +1
Query 5 VRPSVSEPTKRRHSGGFIRAIGGLFKRRSSDANGLSAP 42
V + P K+R G +RAIGG F+R SDA+ + P
Sbjct 1036834 VHAATGRPPKKRKHRGLMRAIGGFFRRNCSDADSDTRP 1036947
>HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:1:905110:1
REF
Length=905110
Score = 100 bits (249), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/90 (57%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Frame = +2
Query 132 TDTPELLLAAESESGDEYGAEPARLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSL 191
TD+ ELL AES SG+E +P R+SFL FGGS+ +STF P+L PS+ DD+H +++RP L
Sbjct 505175 TDSSELL-RAESSSGNESNVDPLRVSFLIFGGSEVDSTFEPELHPSEYDDVHGSEIRPVL 505351
Query 192 QAKMPQFFSPPVVEHMRRSSILPDPREYEF 221
Q KMP FFS P+ E +RRSS DP+EYE
Sbjct 505352 QNKMPLFFSLPLAERLRRSSAKSDPKEYEL 505441
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/37 (46%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query 8 SVSEPT--KRRHSGGFIRAIGGLFKRRSSDANGLSAP 42
SVS+PT K++ G IRA+G FKR+ SD + P
Sbjct 504794 SVSQPTEKKKKPHRGLIRAVGVFFKRKCSDGDATVRP 504904
>PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_107:1:52321:1
REF
Length=52321
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 1/65 (2%)
Frame = +3
Query 158 FLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMPQFFSPPVVEHMRRSSIL-PDP 216
FLF+GGSD + F PDLRPS LD + + +RP ++ MP FFS P E++RRSSIL DP
Sbjct 44022 FLFYGGSDVDGAFKPDLRPSHLDLVQPSAIRPVVKQHMPVFFSAPQYENLRRSSILGADP 44201
Query 217 REYEF 221
REYEF
Sbjct 44202 REYEF 44216
>PYIR:scaffold_690 pir_scaffold_690 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_690:1:17839:1
REF
Length=17839
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (68%), Gaps = 1/68 (1%)
Frame = -3
Query 155 RLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMPQFFSPPVVE-HMRRSSIL 213
+ FLF+ GS +++F P+ S + ++ N +RPSL+ +MP FFSPP + +RRSSIL
Sbjct 2231 QYQFLFYPGSAEDNSFKPEKVHSTVVEIDYNAIRPSLKLEMPVFFSPPKEQTSLRRSSIL 2052
Query 214 PDPREYEF 221
DPREYE
Sbjct 2051 TDPREYEL 2028
>PYUU:scaffold_2006 scf1117875582006 dna:supercontig supercontig:pug:scf1117875582006:1:1270039:1
REF
Length=1270039
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (64%), Gaps = 2/66 (3%)
Frame = -3
Query 158 FLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMPQFFSPPV--VEHMRRSSILPD 215
FLF+ GS +++F P+ S + ++ N +RPSL +MP FFSPP RRSSIL D
Sbjct 815612 FLFYPGSAEDNSFKPEKVTSSIVEIDYNAIRPSLTLQMPVFFSPPTEPSNFPRRSSILTD 815433
Query 216 PREYEF 221
PREYE
Sbjct 815432 PREYEL 815415
>PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_2169:1:5775:1
REF
Length=5775
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (62%), Gaps = 0/47 (0%)
Frame = -3
Query 155 RLSFLFFGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMPQFFSP 201
R F F+ GS +++F P+ S + ++ N +RPSL +MP FFSP
Sbjct 2941 RYQFHFYSGSAEDNSFKPERVHSTVAEIDYNTIRPSLTLQMPVFFSP 2801
>PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:pag1_scaffolds_v1:pag1_scaffold_351:1:31055:1
REF
Length=31055
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/67 (36%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Frame = -1
Query 158 FLFFGGSDNESTFVPD-----LRPSDLDDLHENDLRPSLQA--KMPQFFSPPVVEHMRRS 210
++ F G++ S + PD +P + DD+H ++LRPSL ++P FF+PP E +
Sbjct 5849 YVLFLGTER-SGYKPDHLRPKYQPQNHDDVHLDELRPSLLEGRQLPVFFTPPPPEL---A 5682
Query 211 SILPDPR 217
+I P PR
Sbjct 5681 AITPRPR 5661
>PLHA:NW_020187244.1 Plasmopara halstedii genome assembly, contig:
Scaffold_323, whole genome shotgun sequence
Length=2746546
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (51%), Gaps = 10/87 (11%)
Frame = +3
Query 139 LAAESESGDEYGAEPARLSFLF--FGGSDNESTFVPDLRPSDLDDLHENDLRPSLQAKMP 196
+++ + S D+ G R+SFL+ + S ++ +P L + L+ N L+P+LQ P
Sbjct 1773426 ISSYNRSHDKSGI---RVSFLYIVYVSSYRSTSPIPSLHRATLN---VNTLQPALQTWQP 1773587
Query 197 QF--FSPPVVEHMRRSSILPDPREYEF 221
++PP R SSIL PR Y
Sbjct 1773588 HEGEYAPPPYNPQRHSSILHHPRGYNL 1773668
Lambda K H a alpha
0.315 0.134 0.385 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 42474658000
Database: OGOB_genomes.fna
Posted date: Sep 16, 2018 3:46 PM
Number of letters in database: 1,297,559,224
Number of sequences in database: 64,241
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40