Full BLAST raw output including alignments follows below the summary table
Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
PHSO:scaffold_2 | 5419042 | 5419449 | 408 | 816 | 0.0 |
PHKE:scaffold_311 | 15368 | 15667 | 301 | 234 | 6e-53 |
PHPA:scaffold_60 | 170737 | 171131 | 408 | 151 | 4e-30 |
PHIF:NW_003303758.1 | 212439 | 212602 | 171 | 81 | 4e-11 |
PYVX:scaffold_107 | 40000 | 40050 | 51 | 72 | 6e-09 |
PYVX:scaffold_158 | 9834 | 9859 | 26 | 42 | 0.80 |
PYUU:scaffold_2014 | 354957 | 354977 | 21 | 42 | 0.80 |
PHRA:scaffold_9 | 684660 | 684685 | 26 | 42 | 0.80 |
APAS:scaffold_38 | 301345 | 301370 | 26 | 42 | 0.80 |
PYIW:scaffold_2169 | 5079 | 5116 | 38 | 41 | 2.8 |
HYAP:scaffold_3 | 291732 | 291759 | 28 | 41 | 2.8 |
APIN:scaffold_32 | 106121 | 106148 | 28 | 41 | 2.8 |
PYUU:scaffold_2035 | 638668 | 638697 | 30 | 40 | 2.8 |
PYAR:scaffold_2856 | 1188 | 1217 | 30 | 40 | 2.8 |
PHSO:scaffold_3 | 3123480 | 3123504 | 25 | 40 | 2.8 |
PHCA:scaffold_65 | 266313 | 266342 | 30 | 40 | 2.8 |
PHCA:scaffold_46 | 302919 | 302948 | 30 | 40 | 2.8 |
SAPA:scaffold_25 | 30191 | 30222 | 32 | 39 | 9.7 |
SAPA:scaffold_8 | 168925 | 168951 | 27 | 39 | 9.7 |
SAPA:scaffold_7 | 566318 | 566344 | 27 | 39 | 9.7 |
SADI:scaffold_12 | 298759 | 298780 | 22 | 39 | 9.7 |
PYVX:scaffold_464 | 8161 | 8187 | 27 | 39 | 9.7 |
PYVX:scaffold_333 | 9366 | 9394 | 31 | 39 | 9.7 |
PYIR:scaffold_2970 | 828 | 859 | 32 | 39 | 9.7 |
PYAR:scaffold_583 | 13786 | 13830 | 46 | 39 | 9.7 |
PHIF:NW_003305359.1 | 2141 | 2176 | 36 | 39 | 9.7 |
PHIF:NW_003303750.1 | 1956225 | 1956260 | 36 | 39 | 9.7 |
PHIF:NW_003303730.1 | 1772655 | 1772683 | 29 | 39 | 9.7 |
HYAP:scaffold_70 | 336961 | 336982 | 22 | 39 | 9.7 |
HYAP:scaffold_43 | 53227 | 53248 | 22 | 39 | 9.7 |
HYAP:scaffold_2 | 544101 | 544122 | 22 | 39 | 9.7 |
APAS:scaffold_10 | 1127742 | 1127763 | 22 | 39 | 9.7 |
ALLA:FR824048 | 33728 | 33749 | 22 | 39 | 9.7 |
SADI:scaffold_58 | 145029 | 145047 | 19 | 38 | 9.7 |
PYVX:scaffold_190 | 14355 | 14378 | 24 | 38 | 9.7 |
PYIW:scaffold_1597 | 4516 | 4534 | 19 | 38 | 9.7 |
PYIR:scaffold_227 | 38870 | 38888 | 19 | 38 | 9.7 |
PYIR:scaffold_29 | 16073 | 16096 | 24 | 38 | 9.7 |
PHRA:scaffold_132 | 81200 | 81223 | 24 | 38 | 9.7 |
PHPA:scaffold_34 | 338885 | 338908 | 24 | 38 | 9.7 |
PHPA:scaffold_26 | 458515 | 458539 | 26 | 38 | 9.7 |
PHPA:scaffold_3 | 1705328 | 1705351 | 24 | 38 | 9.7 |
PHIF:NW_003303736.1 | 692271 | 692289 | 19 | 38 | 9.7 |
PHCA:scaffold_25 | 189330 | 189353 | 24 | 38 | 9.7 |
APAS:scaffold_3 | 1159583 | 1159606 | 24 | 38 | 9.7 |
ALCA:scaffold_76 | 10441 | 10459 | 19 | 38 | 9.7 |
BLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB_genomes.fna
64,241 sequences; 1,297,559,224 total letters
Query= PHYSO_296552
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
PHSO:scaffold_2 737 0.0
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy... 212 6e-53
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ... 137 4e-30
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen... 74.3 4e-11
PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pv... 66.2 6e-09
PYVX:scaffold_158 pve_scaffold_158 dna:supercontig supercontig:pv... 39.2 0.80
PYUU:scaffold_2014 scf1117875582014 dna:supercontig supercontig:p... 39.2 0.80
PHRA:scaffold_9 39.2 0.80
APAS:scaffold_38 supercont1.38 dna:supercontig supercontig:Apha_a... 39.2 0.80
PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:... 38.3 2.8
HYAP:scaffold_3 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_3:... 38.3 2.8
APIN:scaffold_32 supercont1.32 dna:supercontig supercontig:Apha_i... 38.3 2.8
PYUU:scaffold_2035 scf1117875582035 dna:supercontig supercontig:p... 37.4 2.8
PYAR:scaffold_2856 par_scaffold_2856 dna:supercontig supercontig:... 37.4 2.8
PHSO:scaffold_3 37.4 2.8
PHCA:scaffold_65 PHYCAscaffold_65 37.4 2.8
PHCA:scaffold_46 PHYCAscaffold_46 37.4 2.8
SAPA:scaffold_25 supercont2.25 dna:supercontig supercontig:ASM151... 36.5 9.7
SAPA:scaffold_8 supercont2.8 dna:supercontig supercontig:ASM15154... 36.5 9.7
SAPA:scaffold_7 supercont2.7 dna:supercontig supercontig:ASM15154... 36.5 9.7
SADI:scaffold_12 supercont1.12 dna:supercontig supercontig:Sap_di... 36.5 9.7
PYVX:scaffold_464 pve_scaffold_464 dna:supercontig supercontig:pv... 36.5 9.7
PYVX:scaffold_333 pve_scaffold_333 dna:supercontig supercontig:pv... 36.5 9.7
PYIR:scaffold_2970 pir_scaffold_2970 dna:supercontig supercontig:... 36.5 9.7
PYAR:scaffold_583 par_scaffold_583 dna:supercontig supercontig:pa... 36.5 9.7
PHIF:NW_003305359.1 Phytophthora infestans T30-4 supercont1.3311 ... 36.5 9.7
PHIF:NW_003303750.1 Phytophthora infestans T30-4 supercont1.9 gen... 36.5 9.7
PHIF:NW_003303730.1 Phytophthora infestans T30-4 supercont1.29 ge... 36.5 9.7
HYAP:scaffold_70 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7... 36.5 9.7
HYAP:scaffold_43 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_4... 36.5 9.7
HYAP:scaffold_2 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_2:... 36.5 9.7
APAS:scaffold_10 supercont1.10 dna:supercontig supercontig:Apha_a... 36.5 9.7
ALLA:FR824048 dna:supercontig supercontig:ENA1:FR824048:1:366484:... 36.5 9.7
SADI:scaffold_58 supercont1.58 dna:supercontig supercontig:Sap_di... 35.6 9.7
PYVX:scaffold_190 pve_scaffold_190 dna:supercontig supercontig:pv... 35.6 9.7
PYIW:scaffold_1597 piw_scaffold_1597 dna:supercontig supercontig:... 35.6 9.7
PYIR:scaffold_227 pir_scaffold_227 dna:supercontig supercontig:pi... 35.6 9.7
PYIR:scaffold_29 pir_scaffold_29 dna:supercontig supercontig:pir_... 35.6 9.7
PHRA:scaffold_132 35.6 9.7
PHPA:scaffold_34 NW_008649020.1 Phytophthora parasitica INRA-310 ... 35.6 9.7
PHPA:scaffold_26 NW_008649012.1 Phytophthora parasitica INRA-310 ... 35.6 9.7
PHPA:scaffold_3 NW_008648989.1 Phytophthora parasitica INRA-310 u... 35.6 9.7
PHIF:NW_003303736.1 Phytophthora infestans T30-4 supercont1.23 ge... 35.6 9.7
PHCA:scaffold_25 PHYCAscaffold_25 35.6 9.7
APAS:scaffold_3 supercont1.3 dna:supercontig supercontig:Apha_ast... 35.6 9.7
ALCA:scaffold_76 AcNc2_CONTIG_76_length_86770 dna:supercontig sup... 35.6 9.7
>PHSO:scaffold_2
Length=11587142
Score = 737 bits (816), Expect = 0.0
Identities = 408/408 (100%), Gaps = 0/408 (0%)
Strand=Plus/Plus
Query 1 ATGAAGAAGCTCGTCAACAATGTCGATATTTCCGCGACGAATCGAGGTGGCAGCGGCAGG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419042 ATGAAGAAGCTCGTCAACAATGTCGATATTTCCGCGACGAATCGAGGTGGCAGCGGCAGG 5419101
Query 61 ATAGCCGTCTTGTCCCCTGGTACTGTGAGCGATTGCAGTGCCACGTCGGATGAGGACATT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419102 ATAGCCGTCTTGTCCCCTGGTACTGTGAGCGATTGCAGTGCCACGTCGGATGAGGACATT 5419161
Query 121 TTGGCCGAAATCTGGGCCATGCGGTCGCCACGTTTGGACGGCGCGAGCGGTGACGATCTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419162 TTGGCCGAAATCTGGGCCATGCGGTCGCCACGTTTGGACGGCGCGAGCGGTGACGATCTG 5419221
Query 181 CCTGAGGTGGACGATGAGTTATCCGAGACAGCGCCCATGGAGTTCCTGTTTTTCTCGGGC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419222 CCTGAGGTGGACGATGAGTTATCCGAGACAGCGCCCATGGAGTTCCTGTTTTTCTCGGGC 5419281
Query 241 TGCCCGGACGACAAGAACCTGCGCGTGTTGGATGTCGGATACCGACGCCTACGATCGAAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419282 TGCCCGGACGACAAGAACCTGCGCGTGTTGGATGTCGGATACCGACGCCTACGATCGAAC 5419341
Query 301 CCGCGGGCGACCCGGTACCCGGTCACACCGTCCTACGCGACATCCGTCCCCATCAAGCCC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419342 CCGCGGGCGACCCGGTACCCGGTCACACCGTCCTACGCGACATCCGTCCCCATCAAGCCC 5419401
Query 361 ACGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCGCTTCGGCTAG 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5419402 ACGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCGCTTCGGCTAG 5419449
>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1
REF
Length=43504
Score = 212 bits (234), Expect = 6e-53
Identities = 229/301 (76%), Gaps = 2/301 (1%)
Strand=Plus/Minus
Query 106 TCGGATGAGGACATTTTGGCCGAAATCTGGGCCATGCGGTCGCCA-CGTTTGGACGGCGC 164
||||| |||||||||||||| || || ||||| || || || ||| || ||||
Sbjct 15667 TCGGACGAGGACATTTTGGCTGAGATATGGGCATCACGCTCACCGTCGTGTG-ACGGTAT 15609
Query 165 GAGCGGTGACGATCTGCCTGAGGTGGACGATGAGTTATCCGAGACAGCGCCCATGGAGTT 224
|| |||||| ||||||||||| ||||| || || || || | || |||||||||||
Sbjct 15608 TGCCGATGACGACCTGCCTGAGGTCGACGAAGACTTCTCACAGTCTGCACCCATGGAGTT 15549
Query 225 CCTGTTTTTCTCGGGCTGCCCGGACGACAAGAACCTGCGCGTGTTGGATGTCGGATACCG 284
| ||||||| | |||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 15548 CGTGTTTTTTACAGGCTGCCCGGACGACAGGAACCTGCGCGAGTTGGATGTCGGATATCG 15489
Query 285 ACGCCTACGATCGAACCCGCGGGCGACCCGGTACCCGGTCACACCGTCCTACGCGACATC 344
||| | || || ||| |||| || | |||| ||| ||| |||| || || || |
Sbjct 15488 ACGACATCGCTCCAACACGCGAGCTGCGCGGTGCCCATCGACATCGTCGTATGCAACGAC 15429
Query 345 CGTCCCCATCAAGCCCACGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCGCTTCGG 404
| |||| |||||||| |||||||| ||||| ||||| || ||||| | || ||| | ||
Sbjct 15428 CATCCCTATCAAGCCAACGCTCGTGTCCAAGATGCCTCCACTGTTCGTTCCCCGCCTGGG 15369
Query 405 C 405
|
Sbjct 15368 C 15368
>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.60, whole genome shotgun
sequence
Length=386225
Score = 137 bits (151), Expect = 4e-30
Identities = 278/408 (68%), Gaps = 20/408 (5%)
Strand=Plus/Minus
Query 1 ATGAAGAAGCTCGTCAACAATGTCGATATTTCCGCGACGAATCGAGGTGGCAGCGGCA-- 58
||| |||| |||| ||| || ||| | || | || | ||||||||||| |||
Sbjct 171131 ATGCAGAAACTCGCCAAAAAGTCCGACAGGTCAGTGAGAGAAAGAGGTGGCAGCTGCAAC 171072
Query 59 -GGATAGCCGTCTTGTCCCCTGGTACTGTGAGCGATTGCAGTGCCACGTCGGATGAGGAC 117
| || || | | || || || |||||||||||||||| || ||| || ||||
Sbjct 171071 CGAATCGCTTTGCTATCTACTACCACCGTGAGCGATTGCAGTGTCATGTCAGACCAGGAG 171012
Query 118 ATTTTGGCCGAAATCTGGGCCATGCGGTCGCCACGTTTGGACGGCGCGAGCGGTGACGAT 177
|| ||||| || |||||||| ||||| || | ||| | | | ||||| ||| ||
Sbjct 171011 ATCTTGGCAGAGATCTGGGCTATGCGTTCATCGTCCATGGGCCGGGTGAGCGATGA-GAG 170953
Query 178 C-TGCCTGAGGTGGACGATGAGTTATCCGAGACAGCGCCCATGGAGTTCCTGTTTTTCTC 236
| |||||| || ||||| | || | || || ||||||||||||||| |||| ||| |
Sbjct 170952 CATGCCTGTAGTAGACGACAAATTGGCGGATACTGCGCCCATGGAGTTCTTGTTCTTCAC 170893
Query 237 GGGCTGCCCGGACGACAAGAACCTGCGCGTGTTGGATGTCGGATACCGACGCCTACGATC 296
||||||||| || ||||| | || ||||||| || |||| || |||||
Sbjct 170892 GGGCTGCCCAGATGACAACAGCC---------TGGATGTAAGACACCGGCGGGCTCGATC 170842
Query 297 GAA--CCCG-CGGGCGACCCGGTACCCGGTCACACCGTCCTACGCGACATCCGTCCCCAT 353
||| |||| | |||| |||||| | || ||||| | | | || | |||||| |
Sbjct 170841 GAAAGCCCGACTGGCG---CGGTACAGTGCGACGCCGTCTTTCACAACGACTGTCCCCGT 170785
Query 354 CAAGCCCACGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCGCTT 401
|| | || | || ||||||||||| ||||| || | || |||||
Sbjct 170784 AAAATCGACATTGGTGTCCAACATGCCACCGCTATTCGTGCCACGCTT 170737
>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1
genomic scaffold, whole genome shotgun sequence
Length=6928287
Score = 74.3 bits (81), Expect = 4e-11
Identities = 121/171 (71%), Gaps = 14/171 (8%)
Strand=Plus/Plus
Query 90 CGATTGCAGTGCCACGTCGGATGAGGACATTTTGGCCGAAATCTGGGCCATGCGGTCGCC 149
|||||||||| |||||| | ||||| ||||||||||| |||||||| ||||| || |
Sbjct 212439 CGATTGCAGTATCACGTCAAACGAGGAGATTTTGGCCGAGATCTGGGCTATGCGCTCATC 212498
Query 150 ACGTTTGGACGGC----GCGAGCGGTGACGATCTGCCTGAGGTGGACGATGAGTTATC-- 203
| ||||| | ||| | ||| ||| || ||| | || ||| | | |
Sbjct 212499 ----CTTCACGGCCCAAGTGAGTGATGAAGATGTGTCTGCCGCAGATGATAA---AGCGG 212551
Query 204 CGAG-ACAGCGCCCATGGAGTTCCTGTTTTTCTCGGGCTGCCCGGACGACA 253
|||| | |||||||| || ||| |||| ||| ||||||||| |||||||
Sbjct 212552 CGAGCTCTGCGCCCATAGAATTCTTGTTCTTCATGGGCTGCCCAGACGACA 212602
>PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_107:1:52321:1
REF
Length=52321
Score = 66.2 bits (72), Expect = 6e-09
Identities = 45/51 (88%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 211 GCGCCCATGGAGTTCCTGTTTTTCTCGGGCTGCCCGGACGACAAGAACCTG 261
||||| ||||||||||| || ||||||||||| ||||||||| |||||||
Sbjct 40000 GCGCCGATGGAGTTCCTCTTCTTCTCGGGCTGTCCGGACGACTCGAACCTG 40050
Score = 44.6 bits (48), Expect = 0.019
Identities = 33/39 (85%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 360 CACGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCG 398
||||||||| || |||||||||||||||| | |||||
Sbjct 41666 CACGCTCGTGACCGACATGCCGCCGCTGTTCACGCCGCG 41704
Score = 41.9 bits (45), Expect = 0.23
Identities = 33/40 (83%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 213 GCCCATGGAGTTCCTGTTTTTCTCGGGCTGCCCGGACGAC 252
||| ||||||||||| || ||| || |||| ||||| |||
Sbjct 41501 GCCGATGGAGTTCCTCTTCTTCCCGAGCTGTCCGGATGAC 41540
Score = 41.0 bits (44), Expect = 0.23
Identities = 31/37 (84%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 362 CGCTCGTTTCCAACATGCCGCCGCTGTTTGCACCGCG 398
||||||| | | ||||||||||| |||| || |||||
Sbjct 40151 CGCTCGTGTACGACATGCCGCCGGTGTTCGCGCCGCG 40187
>PYVX:scaffold_158 pve_scaffold_158 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_158:1:42935:1
REF
Length=42935
Score = 39.2 bits (42), Expect = 0.80
Identities = 24/26 (92%), Gaps = 0/26 (0%)
Strand=Plus/Plus
Query 34 GCGACGAATCGAGGTGGCAGCGGCAG 59
|||||| ||||| |||||||||||||
Sbjct 9834 GCGACGTATCGAAGTGGCAGCGGCAG 9859
>PYUU:scaffold_2014 scf1117875582014 dna:supercontig supercontig:pug:scf1117875582014:1:494327:1
REF
Length=494327
Score = 39.2 bits (42), Expect = 0.80
Identities = 21/21 (100%), Gaps = 0/21 (0%)
Strand=Plus/Minus
Query 2 TGAAGAAGCTCGTCAACAATG 22
|||||||||||||||||||||
Sbjct 354977 TGAAGAAGCTCGTCAACAATG 354957
>PHRA:scaffold_9
Length=727265
Score = 39.2 bits (42), Expect = 0.80
Identities = 24/26 (92%), Gaps = 0/26 (0%)
Strand=Plus/Minus
Query 163 GCGAGCGGTGACGATCTGCCTGAGGT 188
||||||||||||||||| ||||| ||
Sbjct 684685 GCGAGCGGTGACGATCTTCCTGAAGT 684660
>APAS:scaffold_38 supercont1.38 dna:supercontig supercontig:Apha_asta_APO3_V1:supercont1.38:1:602747:1
REF
Length=602747
Score = 39.2 bits (42), Expect = 0.80
Identities = 24/26 (92%), Gaps = 0/26 (0%)
Strand=Plus/Plus
Query 141 GCGGTCGCCACGTTTGGACGGCGCGA 166
|||| ||||||||||||| |||||||
Sbjct 301345 GCGGCCGCCACGTTTGGATGGCGCGA 301370
>PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_2169:1:5775:1
REF
Length=5775
Score = 38.3 bits (41), Expect = 2.8
Identities = 31/38 (82%), Gaps = 0/38 (0%)
Strand=Plus/Minus
Query 352 ATCAAGCCCACGCTCGTTTCCAACATGCCGCCGCTGTT 389
||||| || |||||||| ||||||||||| || |||
Sbjct 5116 ATCAACCCGACGCTCGTGCGCAACATGCCGCGGCCGTT 5079
Score = 35.6 bits (38), Expect = 9.7
Identities = 56/80 (70%), Gaps = 3/80 (4%)
Strand=Plus/Minus
Query 212 CGCCCATGGAGTTCCTGTTTTTCTCGGGCTGCCCGGA---CGACAAGAACCTGCGCGTGT 268
||| |||||||||||| || || ||| |||| || ||||| |||||| || |
Sbjct 5277 CGCGCATGGAGTTCCTCTTCTTTGGCGGCAGCCCCGATGCCGACAGCAACCTGAACGAGC 5218
Query 269 TGGATGTCGGATACCGACGC 288
| || || || |||| |||
Sbjct 5217 TCGAAGTGGGCCACCGCCGC 5198
>HYAP:scaffold_3 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_3:1:1157540:1
REF
Length=1157540
Score = 38.3 bits (41), Expect = 2.8
Identities = 25/28 (89%), Gaps = 0/28 (0%)
Strand=Plus/Minus
Query 295 TCGAACCCGCGGGCGACCCGGTACCCGG 322
||||| |||||| || ||||||||||||
Sbjct 291759 TCGAAGCCGCGGCCGGCCCGGTACCCGG 291732
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Plus
Query 14 TCAACAATGTCGATATTTCCGC 35
|||||||||||| |||||||||
Sbjct 887804 TCAACAATGTCGCTATTTCCGC 887825
>APIN:scaffold_32 supercont1.32 dna:supercontig supercontig:Apha_inva_NJM9701_V1:supercont1.32:1:740502:1
REF
Length=740502
Score = 38.3 bits (41), Expect = 2.8
Identities = 25/28 (89%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 99 TGCCACGTCGGATGAGGACATTTTGGCC 126
|| ||||||| | |||||||||||||||
Sbjct 106121 TGGCACGTCGAAGGAGGACATTTTGGCC 106148
>PYUU:scaffold_2035 scf1117875582035 dna:supercontig supercontig:pug:scf1117875582035:1:696189:1
REF
Length=696189
Score = 37.4 bits (40), Expect = 2.8
Identities = 26/30 (87%), Gaps = 0/30 (0%)
Strand=Plus/Minus
Query 148 CCACGTTTGGACGGCGCGAGCGGTGACGAT 177
||||| |||||||||| |||||||||||
Sbjct 638697 CCACGCTTGGACGGCGACCGCGGTGACGAT 638668
>PYAR:scaffold_2856 par_scaffold_2856 dna:supercontig supercontig:par_scaffolds_v1:par_scaffold_2856:1:4187:1
REF
Length=4187
Score = 37.4 bits (40), Expect = 2.8
Identities = 26/30 (87%), Gaps = 0/30 (0%)
Strand=Plus/Minus
Query 144 GTCGCCACGTTTGGACGGCGCGAGCGGTGA 173
||||||| ||| |||||||||||| || ||
Sbjct 1217 GTCGCCATGTTGGGACGGCGCGAGGGGCGA 1188
>PHSO:scaffold_3
Length=10773376
Score = 37.4 bits (40), Expect = 2.8
Identities = 23/25 (92%), Gaps = 0/25 (0%)
Strand=Plus/Minus
Query 384 GCTGTTTGCACCGCGCTTCGGCTAG 408
|||||||||| | ||||||||||||
Sbjct 3123504 GCTGTTTGCATCACGCTTCGGCTAG 3123480
Score = 37.4 bits (40), Expect = 2.8
Identities = 23/25 (92%), Gaps = 0/25 (0%)
Strand=Plus/Plus
Query 384 GCTGTTTGCACCGCGCTTCGGCTAG 408
|||||||||| | ||||||||||||
Sbjct 3365158 GCTGTTTGCATCACGCTTCGGCTAG 3365182
>PHCA:scaffold_65 PHYCAscaffold_65
Length=307771
Score = 37.4 bits (40), Expect = 2.8
Identities = 26/30 (87%), Gaps = 0/30 (0%)
Strand=Plus/Minus
Query 159 CGGCGCGAGCGGTGACGATCTGCCTGAGGT 188
|||||||||| ||||||||||| || |||
Sbjct 266342 CGGCGCGAGCTGTGACGATCTGATTGCGGT 266313
>PHCA:scaffold_46 PHYCAscaffold_46
Length=525601
Score = 37.4 bits (40), Expect = 2.8
Identities = 26/30 (87%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 159 CGGCGCGAGCGGTGACGATCTGCCTGAGGT 188
|||||||||| ||||||||||| || |||
Sbjct 302919 CGGCGCGAGCTGTGACGATCTGATTGCGGT 302948
>SAPA:scaffold_25 supercont2.25 dna:supercontig supercontig:ASM15154v2:supercont2.25:1:429761:1
REF
Length=429761
Score = 36.5 bits (39), Expect = 9.7
Identities = 27/32 (84%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 294 ATCGAACCCGCGGGCGACCCGGTACCCGGTCA 325
||||| ||||| ||||||||||||| ||||
Sbjct 30222 ATCGAGACCGCGCGCGACCCGGTACCTAGTCA 30191
>SAPA:scaffold_8 supercont2.8 dna:supercontig supercontig:ASM15154v2:supercont2.8:1:845095:1
REF
Length=845095
Score = 36.5 bits (39), Expect = 9.7
Identities = 24/27 (89%), Gaps = 0/27 (0%)
Strand=Plus/Minus
Query 356 AGCCCACGCTCGTTTCCAACATGCCGC 382
||| ||||||||| ||||||||||||
Sbjct 168951 AGCTCACGCTCGTCACCAACATGCCGC 168925
>SAPA:scaffold_7 supercont2.7 dna:supercontig supercontig:ASM15154v2:supercont2.7:1:943373:1
REF
Length=943373
Score = 36.5 bits (39), Expect = 9.7
Identities = 24/27 (89%), Gaps = 0/27 (0%)
Strand=Plus/Plus
Query 84 TGTGAGCGATTGCAGTGCCACGTCGGA 110
|| ||||||||||| ||||| ||||||
Sbjct 566318 TGCGAGCGATTGCAATGCCATGTCGGA 566344
>SADI:scaffold_12 supercont1.12 dna:supercontig supercontig:Sap_diclina_VS20_V1:supercont1.12:1:915569:1
REF
Length=915569
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Plus
Query 157 GACGGCGCGAGCGGTGACGATC 178
||| ||||||||||||||||||
Sbjct 298759 GACTGCGCGAGCGGTGACGATC 298780
>PYVX:scaffold_464 pve_scaffold_464 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_464:1:23545:1
REF
Length=23545
Score = 36.5 bits (39), Expect = 9.7
Identities = 24/27 (89%), Gaps = 0/27 (0%)
Strand=Plus/Minus
Query 155 TGGACGGCGCGAGCGGTGACGATCTGC 181
|||||||||||||| | ||||| ||||
Sbjct 8187 TGGACGGCGCGAGCTGCGACGACCTGC 8161
>PYVX:scaffold_333 pve_scaffold_333 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_333:1:29604:1
REF
Length=29604
Score = 36.5 bits (39), Expect = 9.7
Identities = 27/31 (87%), Gaps = 2/31 (6%)
Strand=Plus/Plus
Query 137 CCATGCGGTCGCCACGTTTGGACGGCGCGAG 167
|||||||| |||| || |||||||||||||
Sbjct 9366 CCATGCGGCCGCC--GTATGGACGGCGCGAG 9394
>PYIR:scaffold_2970 pir_scaffold_2970 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_2970:1:2015:1
REF
Length=2015
Score = 36.5 bits (39), Expect = 9.7
Identities = 27/32 (84%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 352 ATCAAGCCCACGCTCGTTTCCAACATGCCGCC 383
|||| |||||||||||| || || ||| ||||
Sbjct 859 ATCACGCCCACGCTCGTCTCAAAGATGACGCC 828
>PYAR:scaffold_583 par_scaffold_583 dna:supercontig supercontig:par_scaffolds_v1:par_scaffold_583:1:16086:1
REF
Length=16086
Score = 36.5 bits (39), Expect = 9.7
Identities = 37/46 (80%), Gaps = 2/46 (4%)
Strand=Plus/Minus
Query 132 CTGGGCCATGCGGTCGCCACGTTTGGACGG-CGCGAGCGGTGACGA 176
|||||||||||||| |||||| ||||| || ||| |||||||
Sbjct 13830 CTGGGCCATGCGGT-TCCACGTCGAGACGGCCGACAGCAGTGACGA 13786
>PHIF:NW_003305359.1 Phytophthora infestans T30-4 supercont1.3311
genomic scaffold, whole genome shotgun sequence
Length=2579
Score = 36.5 bits (39), Expect = 9.7
Identities = 30/36 (83%), Gaps = 2/36 (6%)
Strand=Plus/Plus
Query 153 TTTGGACGGCGCGAG--CGGTGACGATCTGCCTGAG 186
|||| ||| |||| | |||| ||||||||||||||
Sbjct 2141 TTTGTACGTCGCGTGTCCGGTCACGATCTGCCTGAG 2176
>PHIF:NW_003303750.1 Phytophthora infestans T30-4 supercont1.9
genomic scaffold, whole genome shotgun sequence
Length=4027111
Score = 36.5 bits (39), Expect = 9.7
Identities = 30/36 (83%), Gaps = 2/36 (6%)
Strand=Plus/Minus
Query 153 TTTGGACGGCGCGAG--CGGTGACGATCTGCCTGAG 186
|||| ||| |||| | |||| ||||||||||||||
Sbjct 1956260 TTTGTACGTCGCGGGTCCGGTCACGATCTGCCTGAG 1956225
>PHIF:NW_003303730.1 Phytophthora infestans T30-4 supercont1.29
genomic scaffold, whole genome shotgun sequence
Length=2113949
Score = 36.5 bits (39), Expect = 9.7
Identities = 26/29 (90%), Gaps = 1/29 (3%)
Strand=Plus/Plus
Query 116 ACATTTTGGCCGAAATCTG-GGCCATGCG 143
|||| |||||||||||||| |||||| ||
Sbjct 1772655 ACATGTTGGCCGAAATCTGCGGCCATACG 1772683
>HYAP:scaffold_70 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_70:1:339722:1
REF
Length=339722
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Minus
Query 14 TCAACAATGTCGATATTTCCGC 35
|||||||||||| |||||||||
Sbjct 336982 TCAACAATGTCGCTATTTCCGC 336961
>HYAP:scaffold_43 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_43:1:434001:1
REF
Length=434001
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Minus
Query 14 TCAACAATGTCGATATTTCCGC 35
|||||||||||| |||||||||
Sbjct 53248 TCAACAATGTCGCTATTTCCGC 53227
>HYAP:scaffold_2 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_2:1:1175308:1
REF
Length=1175308
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Plus
Query 14 TCAACAATGTCGATATTTCCGC 35
|||||||||||| |||||||||
Sbjct 544101 TCAACAATGTCGCTATTTCCGC 544122
>APAS:scaffold_10 supercont1.10 dna:supercontig supercontig:Apha_asta_APO3_V1:supercont1.10:1:1517454:1
REF
Length=1517454
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Minus
Query 345 CGTCCCCATCAAGCCCACGCTC 366
|||||||||||||| |||||||
Sbjct 1127763 CGTCCCCATCAAGCTCACGCTC 1127742
>ALLA:FR824048 dna:supercontig supercontig:ENA1:FR824048:1:366484:1
REF
Length=366484
Score = 36.5 bits (39), Expect = 9.7
Identities = 21/22 (95%), Gaps = 0/22 (0%)
Strand=Plus/Plus
Query 193 GATGAGTTATCCGAGACAGCGC 214
||||||||||||||||||| ||
Sbjct 33728 GATGAGTTATCCGAGACAGAGC 33749
>SADI:scaffold_58 supercont1.58 dna:supercontig supercontig:Sap_diclina_VS20_V1:supercont1.58:1:346940:1
REF
Length=346940
Score = 35.6 bits (38), Expect = 9.7
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 345 CGTCCCCATCAAGCCCACG 363
|||||||||||||||||||
Sbjct 145047 CGTCCCCATCAAGCCCACG 145029
>PYVX:scaffold_190 pve_scaffold_190 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_190:1:40235:1
REF
Length=40235
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Minus
Query 234 CTCGGGCTGCCCGGACGACAAGAA 257
||||||| |||||||||||||||
Sbjct 14378 CTCGGGCGTCCCGGACGACAAGAA 14355
>PYIW:scaffold_1597 piw_scaffold_1597 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_1597:1:8004:1
REF
Length=8004
Score = 35.6 bits (38), Expect = 9.7
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Plus
Query 160 GGCGCGAGCGGTGACGATC 178
|||||||||||||||||||
Sbjct 4516 GGCGCGAGCGGTGACGATC 4534
>PYIR:scaffold_227 pir_scaffold_227 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_227:1:39172:1
REF
Length=39172
Score = 35.6 bits (38), Expect = 9.7
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 247 GACGACAAGAACCTGCGCG 265
|||||||||||||||||||
Sbjct 38888 GACGACAAGAACCTGCGCG 38870
>PYIR:scaffold_29 pir_scaffold_29 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_29:1:80976:1
REF
Length=80976
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Minus
Query 373 AACATGCCGCCGCTGTTTGCACCG 396
|||||||||||| |||||||| ||
Sbjct 16096 AACATGCCGCCGGTGTTTGCAGCG 16073
>PHRA:scaffold_132
Length=96342
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 49 GGCAGCGGCAGGATAGCCGTCTTG 72
||||||||||||||||| |||||
Sbjct 81200 GGCAGCGGCAGGATAGCGTTCTTG 81223
>PHPA:scaffold_34 NW_008649020.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.34, whole genome shotgun
sequence
Length=723591
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Minus
Query 351 CATCAAGCCCACGCTCGTTTCCAA 374
||||| |||||||||||||||||
Sbjct 338908 CATCACTCCCACGCTCGTTTCCAA 338885
>PHPA:scaffold_26 NW_008649012.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.26, whole genome shotgun
sequence
Length=897753
Score = 35.6 bits (38), Expect = 9.7
Identities = 24/26 (92%), Gaps = 1/26 (4%)
Strand=Plus/Plus
Query 151 CGTTTGGACGGCGCGAGCGGTGACGA 176
|||||||| ||| |||||||||||||
Sbjct 458515 CGTTTGGA-GGCACGAGCGGTGACGA 458539
>PHPA:scaffold_3 NW_008648989.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.3, whole genome shotgun
sequence
Length=2979218
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Minus
Query 5 AGAAGCTCGTCAACAATGTCGATA 28
|| |||||||||||||| ||||||
Sbjct 1705351 AGTAGCTCGTCAACAATTTCGATA 1705328
>PHIF:NW_003303736.1 Phytophthora infestans T30-4 supercont1.23
genomic scaffold, whole genome shotgun sequence
Length=2389742
Score = 35.6 bits (38), Expect = 9.7
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 261 GCGCGTGTTGGATGTCGGA 279
|||||||||||||||||||
Sbjct 692289 GCGCGTGTTGGATGTCGGA 692271
>PHCA:scaffold_25 PHYCAscaffold_25
Length=841216
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Plus
Query 351 CATCAAGCCCACGCTCGTTTCCAA 374
||||| |||||||||||||||||
Sbjct 189330 CATCACACCCACGCTCGTTTCCAA 189353
>APAS:scaffold_3 supercont1.3 dna:supercontig supercontig:Apha_asta_APO3_V1:supercont1.3:1:1971712:1
REF
Length=1971712
Score = 35.6 bits (38), Expect = 9.7
Identities = 22/24 (92%), Gaps = 0/24 (0%)
Strand=Plus/Minus
Query 14 TCAACAATGTCGATATTTCCGCGA 37
|||| | |||||||||||||||||
Sbjct 1159606 TCAAAACTGTCGATATTTCCGCGA 1159583
>ALCA:scaffold_76 AcNc2_CONTIG_76_length_86770 dna:supercontig
supercontig:ASM107853v1:AcNc2_CONTIG_76_length_86770:1:86770:1
REF
Length=86770
Score = 35.6 bits (38), Expect = 9.7
Identities = 19/19 (100%), Gaps = 0/19 (0%)
Strand=Plus/Minus
Query 11 TCGTCAACAATGTCGATAT 29
|||||||||||||||||||
Sbjct 10459 TCGTCAACAATGTCGATAT 10441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488429042881
Database: OGOB_genomes.fna
Posted date: Sep 16, 2018 3:46 PM
Number of letters in database: 1,297,559,224
Number of sequences in database: 64,241
Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2