Full BLAST raw output including alignments follows below the summary table
| Hit Name |
Hit Start |
Hit End |
HSP Length |
HSP Score |
HSP Significance |
| PHKE:scaffold_311 | 13587 | 14252 | 666 | 1332 | 0.0 |
| PHIF:NW_003303758.1 | 217112 | 217719 | 634 | 345 | 1e-82 |
| PHPA:scaffold_60 | 168867 | 169481 | 648 | 307 | 3e-72 |
| PHCA:scaffold_9 | 514883 | 515494 | 642 | 261 | 9e-60 |
| PHSO:scaffold_2 | 5421374 | 5421724 | 373 | 197 | 2e-42 |
| PLHA:NW_020187445.1 | 1037251 | 1037435 | 185 | 130 | 2e-24 |
| HYAP:scaffold_7 | 505157 | 505440 | 287 | 87 | 2e-12 |
| PYIW:scaffold_2169 | 2568 | 2608 | 41 | 47 | 0.11 |
| PYVX:scaffold_107 | 44142 | 44219 | 78 | 44 | 0.38 |
| PYVX:scaffold_24 | 51559 | 51593 | 35 | 43 | 1.3 |
| PYIR:scaffold_5 | 4779 | 4812 | 34 | 43 | 1.3 |
| PHKE:scaffold_174 | 49959 | 49984 | 26 | 43 | 1.3 |
| PYUU:scaffold_1308 | 62862 | 62887 | 26 | 42 | 1.3 |
| APIN:scaffold_40 | 454176 | 454201 | 26 | 42 | 1.3 |
| PYAR:scaffold_3836 | 388 | 410 | 23 | 41 | 4.7 |
| PYAP:scaffold_351 | 4389 | 4428 | 40 | 41 | 4.7 |
| PYAP:scaffold_6 | 149955 | 149982 | 28 | 41 | 4.7 |
| PHKE:scaffold_114 | 65775 | 65797 | 23 | 41 | 4.7 |
| PYIR:scaffold_115 | 19180 | 19206 | 27 | 40 | 4.7 |
| PYIR:scaffold_85 | 56093 | 56112 | 20 | 40 | 4.7 |
| PYAR:scaffold_3415 | 1753 | 1777 | 25 | 40 | 4.7 |
BLASTN 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: OGOB_genomes.fna
64,241 sequences; 1,297,559,224 total letters
Query= PHYKE_5720
Length=666
Score E
Sequences producing significant alignments: (Bits) Value
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy... 1202 0.0
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen... 312 1e-82
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ... 278 3e-72
PHCA:scaffold_9 PHYCAscaffold_9 236 9e-60
PHSO:scaffold_2 178 2e-42
PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:... 118 2e-24
HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:... 79.7 2e-12
PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:... 43.7 0.11
PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pv... 41.0 0.38
PYVX:scaffold_24 pve_scaffold_24 dna:supercontig supercontig:pve_... 40.1 1.3
PYIR:scaffold_5 pir_scaffold_5 dna:supercontig supercontig:pir_sc... 40.1 1.3
PHKE:scaffold_174 scf_22126_174.1_contig_1 dna:supercontig superc... 40.1 1.3
PYUU:scaffold_1308 scf1117875581308 dna:supercontig supercontig:p... 39.2 1.3
APIN:scaffold_40 supercont1.40 dna:supercontig supercontig:Apha_i... 39.2 1.3
PYAR:scaffold_3836 par_scaffold_3836 dna:supercontig supercontig:... 38.3 4.7
PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:p... 38.3 4.7
PYAP:scaffold_6 pag1_scaffold_6 dna:supercontig supercontig:pag1_... 38.3 4.7
PHKE:scaffold_114 scf_22126_114.1 dna:supercontig supercontig:Phy... 38.3 4.7
PYIR:scaffold_115 pir_scaffold_115 dna:supercontig supercontig:pi... 37.4 4.7
PYIR:scaffold_85 pir_scaffold_85 dna:supercontig supercontig:pir_... 37.4 4.7
PYAR:scaffold_3415 par_scaffold_3415 dna:supercontig supercontig:... 37.4 4.7
>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1
REF
Length=43504
Score = 1202 bits (1332), Expect = 0.0
Identities = 666/666 (100%), Gaps = 0/666 (0%)
Strand=Plus/Minus
Query 1 ATGGAGACGCGCGTCCGTCCATCCGTTTCGGAGCCCACCAAACGCAGACACAGTGGCGGC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14252 ATGGAGACGCGCGTCCGTCCATCCGTTTCGGAGCCCACCAAACGCAGACACAGTGGCGGC 14193
Query 61 TTCATACGAGCCATCGGAGGCCTCTTCAAGCGACGAAGCAGCGATGCCAACGGACTGTCG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14192 TTCATACGAGCCATCGGAGGCCTCTTCAAGCGACGAAGCAGCGATGCCAACGGACTGTCG 14133
Query 121 GCCCCCAGTGACAGTGAATCCTCGCAGCGAAGCACGTCCCGCTGGTCGCGCTTCTCTTTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14132 GCCCCCAGTGACAGTGAATCCTCGCAGCGAAGCACGTCCCGCTGGTCGCGCTTCTCTTTG 14073
Query 181 CGCCACTCTCTGCCTGAGGCCCCCATGGAGGTGGAGGCCGTGGCTGCCCCAGAGGCGGCC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14072 CGCCACTCTCTGCCTGAGGCCCCCATGGAGGTGGAGGCCGTGGCTGCCCCAGAGGCGGCC 14013
Query 241 CCCATCAGGGAGAACGACTCTGTCTCTACGCCTTCGCCCTCTCCTCACCCTGAGGAACCC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 14012 CCCATCAGGGAGAACGACTCTGTCTCTACGCCTTCGCCCTCTCCTCACCCTGAGGAACCC 13953
Query 301 CCAGCTaagaaggccaagaaggctgagaaacccaagaaagagaagaaggagaagaagCCG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13952 CCAGCTAAGAAGGCCAAGAAGGCTGAGAAACCCAAGAAAGAGAAGAAGGAGAAGAAGCCG 13893
Query 361 AAACCCCCTTCCCAAAAGTCCAAACCGTCGCCCACTGACACCCCAGAGTTGCTTCTGGCG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13892 AAACCCCCTTCCCAAAAGTCCAAACCGTCGCCCACTGACACCCCAGAGTTGCTTCTGGCG 13833
Query 421 GCTGAGTCCGAGTCTGGTGACGAGTATGGGGCCGAACCGGCTCGTTTGTCTTTCCTGTTC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13832 GCTGAGTCCGAGTCTGGTGACGAGTATGGGGCCGAACCGGCTCGTTTGTCTTTCCTGTTC 13773
Query 481 TTTGGGGGAAGTGACAACGAAAGCACGTTTGTTCCGGATCTGCGACCCTCTGATCTGGAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13772 TTTGGGGGAAGTGACAACGAAAGCACGTTTGTTCCGGATCTGCGACCCTCTGATCTGGAT 13713
Query 541 GATCTGCATGAGAACGATCTGCGTCCGTCGCTACAGGCCAAAATGCCGCAATTCTTCTCG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13712 GATCTGCATGAGAACGATCTGCGTCCGTCGCTACAGGCCAAAATGCCGCAATTCTTCTCG 13653
Query 601 CCACCAGTGGTGGAGCACATGCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13652 CCACCAGTGGTGGAGCACATGCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAG 13593
Query 661 TTCTGA 666
||||||
Sbjct 13592 TTCTGA 13587
>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1
genomic scaffold, whole genome shotgun sequence
Length=6928287
Score = 312 bits (345), Expect = 1e-82
Identities = 452/634 (71%), Gaps = 37/634 (6%)
Strand=Plus/Plus
Query 40 AAACGCAGACACAGTGGCGGCTTCATACGAGCCATCGGAGGCCTCTTCAAGCGACGAAGC 99
|||||||| ||||| |||| |||| || |||||||| |||||||||||||| | ||
Sbjct 217112 AAACGCAGGCACAG---CGGCCTCATGCGTGCCATCGGCGGCCTCTTCAAGCGCAAATGC 217168
Query 100 AGCGATGCCAACGGACTGTCGGCCCCCAGTGACAGTGAATCCTCGCAGCGAAGCACGTCC 159
||||| ||| ||| |||| || || || ||||| |||||||||| |||||||
Sbjct 217169 AGCGACGCCGACGACGCCACGGCACCTAGCGATAGTGAGGCCTCGCAGCGCCGCACGTCG 217228
Query 160 CGCTGGTCGCGCTTCTC---TTTGCGCCAC---TCTCTGCCTGAGGCCCCCATGGAGGTG 213
|||||||| |||| || || || | | || |||| || || || | || |||
Sbjct 217229 CGCTGGTCACGCTGGTCCCATTCGCATCGCGGGTCGTTGCCCGAAGCGCCGCTAGACGTG 217288
Query 214 GAGGCCGTGGCTGCCCCAGAGGCGGCCCCCATCAGGGAGAACGACTCTGTCTCTACGCCT 273
| ||| ||||| ||||| ||| | ||||||||| |||||||| || || ||||
Sbjct 217289 GCGGCTGTGGCGGCCCCTGAGACTGCCCCCATCCAAGAGAACGATTCAGTGGCTAC---- 217344
Query 274 TCGCCCTCTCCTCACCCTGAGGAACCCCCAGCTaagaaggccaagaaggctgagaaaccc 333
||| |||||| ||||||| | || || |||||||| ||||||||| ||
Sbjct 217345 -----CTCGCCTCACACTGAGGAGTCGCCGGCCAAGAAGGCGAAGAAGGCTAAGGTTG-- 217397
Query 334 aagaaagagaagaaggagaagaa-gCCGAAACCCCCTTCC---CAA-AAGTCCAAACCGT 388
|| | ||| ||||||||| ||| ||||| || || ||| ||| | |||| ||
Sbjct 217398 -AGCACCCTAAGCCGGAGAAGAAAGCC--AACCCGCTGCCTTTCAACAAGACGAAACAGT 217454
Query 389 CGCCCACTGACACCCCAGAGTTGCTTCTGGCGGCTGAGTCCGAGTCTGGTGACGAGTATG 448
| ||||| ||| | |||| |||| || || ||| || ||||||||| |
Sbjct 217455 CACCCACGGACCCGTCAGACCTGCTGCTCGC---------CGACTCGAGTGACGAGTCAG 217505
Query 449 GGGCCGAACCGGCTCGTTTGTCTTTCCTGTTCTTTGGGGGAAGTGACAACGAAAGCACGT 508
| || ||||| || | || ||||| ||||||||||| || |||| || || ||||
Sbjct 217506 GTGCAGAACCTCAACGCGTTTCCTTCCTCTTCTTTGGGGGCAGCGACACTGACAGTACGT 217565
Query 509 TTGTTCCGGATCTGCGACCCTCTGATCTGGATGATCTGCATGAGAACGATCTGCGTCCGT 568
| ||||| ||| | || || || ||||| ||||| || |||||||| | || ||||
Sbjct 217566 TCCAGCCGGAGCTGAGGCCGTCAGAGCTGGACGATCTCCACCAGAACGATATCCGACCGT 217625
Query 569 CGCTACAGGCCAAAATGCCGCAATTCTTCTCGCCACCAGTGGTGGAGCACATGCGTCGGA 628
|||| |||||||| ||||||| ||||||||||| || |||||||| | |||||||| |
Sbjct 217626 CGCTGCAGGCCAAGATGCCGCTCTTCTTCTCGCCGCCCTTGGTGGAGAATATGCGTCGCA 217685
Query 629 GCAGTATCCTGCCGGACCCTCGCGAGTACGAGTT 662
| || |||||||| ||||| |||||||||||
Sbjct 217686 GTAGCATCCTGCCCGACCCGAAGGAGTACGAGTT 217719
>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310
unplaced genomic scaffold supercont2.60, whole genome shotgun
sequence
Length=386225
Score = 278 bits (307), Expect = 3e-72
Identities = 453/648 (70%), Gaps = 51/648 (8%)
Strand=Plus/Minus
Query 33 GCCCACCAAACGCA-GACACAGTGGCGGCTTCATACGAGCCATCGGAGGCCTCTTCAAGC 91
|||||||||||||| ||| | ||||| | || || || ||||| |||||||| ||||
Sbjct 169481 GCCCACCAAACGCAAGACCC----GCGGCATTATGCGCGCTATCGGCGGCCTCTTTAAGC 169426
Query 92 GACGAAGC-AGCGATGCCAACGGACTGTCGGCCCCCAGTGACAGTGAATCCTCGCAGCGA 150
| | |||| ||||| | ||| | || || || |||||||| ||||||| ||
Sbjct 169425 G-CAAAGCCAGCGACGTGGACGACGCGATGGAGCCTAGCGACAGTGAGGCCTCGCAACGC 169367
Query 151 AGCACGTCCCGCTGGTCGCGCTTCTCT---TTGCGCCAC---TCTCTGCCTGAGGCCCCC 204
|||| || |||||||| |||| ||| | || | | || | || || || ||
Sbjct 169366 CGCACATCGCGCTGGTCACGCTGGTCTCACTCGCATCGCGGGTCGTTCCCAGAAGCGCCG 169307
Query 205 ATGGAGGTGGAGGCCGTGGCTGCCCCAGAGGCGGCCCCCATCAGGGAGAACGACTCTGTC 264
| || || | ||||||||| ||||| ||| | ||||||||| ||||||||| || |
Sbjct 169306 CTCGAAGTAGCGGCCGTGGCGGCCCCCGAGACCGCCCCCATCCAGGAGAACGAGTCGGCG 169247
Query 265 TCTACGCCTTCGCCCTCTCCTCACCCTGAGGAACCCCCAGCTaagaaggccaagaaggct 324
|||| |||| || ||||| || || || || || ||||| | ||||| |||
Sbjct 169246 -----GCCT----CCTCGCCCCACCCGGATGAGCCGCCGGCCAAGAAAGTGAAGAAAGCT 169196
Query 325 ------gagaaacccaagaaagagaagaaggagaagaagCCGAAACCCC----CTTCCCA 374
||| | |||| || |||||||| |||| | |||| ||| | |
Sbjct 169195 ACAGTTGAGCACCCCACGACGGAGAAGAA--------AGCC--AGCCCCTTGTCTTTCAA 169146
Query 375 AAAGTCCAAACCGTCGCCCACTGACACCCCAGAGTTGCTTCTGGCGGCTGAGTCCGAGTC 434
||| |||| | ||||||||| ||| | ||||| |||| |||| ||| ||
Sbjct 169145 CAAGACCAAGCAGTCGCCCACCGACCCGTCAGAGCTGCTGATGGC---------CGACTC 169095
Query 435 TGGTGACGAGTATGGGGCCGAACCGGCTCGTTTGTCTTTCCTGTTCTTTGGGGGAAGTGA 494
| ||||||| || || ||||| ||| | || ||||| ||||| || || || ||
Sbjct 169094 GAGCGACGAGTCGGGAGCGGAACCTCAACGTGTCTCCTTCCTCTTCTTCGGAGGCAGCGA 169035
Query 495 CAACGAAAGCACGTTTGTTCCGGATCTGCGACCCTCTGATCTGGATGATCTGCATGAGAA 554
| ||| |||||||| ||||| ||| | || || || ||||||||||||||||||||
Sbjct 169034 CGTCGACAGCACGTTCCAGCCGGAGCTGAGGCCGTCGGAACTGGATGATCTGCATGAGAA 168975
Query 555 CGATCTGCGTCCGTCGCTACAGGCCAAAATGCCGCAATTCTTCTCGCCACCAGTGGTGGA 614
||| | ||||||||||| || || || ||||||| |||||||| || || |||||||
Sbjct 168974 TGATATCCGTCCGTCGCTTCAAGCTAAGATGCCGCTCTTCTTCTCACCGCCTTTGGTGGA 168915
Query 615 GCACATGCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAGTT 662
||| ||||| || ||||| |||||||||||||| |||||||||||
Sbjct 168914 GCATATGCGCCGCAGCAGCATCCTGCCGGACCCGAAAGAGTACGAGTT 168867
>PHCA:scaffold_9 PHYCAscaffold_9
Length=1114135
Score = 236 bits (261), Expect = 9e-60
Identities = 439/642 (68%), Gaps = 42/642 (7%)
Strand=Plus/Plus
Query 33 GCCCACCAAACGCAGACACAGTGGCGGCTTCATACGAGCCATCGGAGGCCTCTTCAAGCG 92
||| |||||||||| ||| | ||| | || || ||||| || || ||||| |||||
Sbjct 514883 GCCTACCAAACGCAAGCACCG---CGGTCTGATGCGCGCCATTGGCGGACTCTTTAAGCG 514939
Query 93 ACGAAGCAGCGATGCCAACGGACTGTCGGCCCCCAGTGACAGTGAATCCTCGCAGCGAAG 152
|||||| || || ||| |||| ||||||||||||||| |||||||||| |
Sbjct 514940 CAAAAGCAGTGACGCGGACGACGCCACGGCGCCCAGTGACAGTGAAGCCTCGCAGCGTCG 514999
Query 153 CACGTCCCGCTGGTCGCGCTTCTCT---TTG---CGCCACTCTCTGCCTGAGGCCCCCAT 206
|||||| |||||||| |||| || | | ||| ||| ||||||| || || |
Sbjct 515000 CACGTCTCGCTGGTCTCGCTGGTCGCACTCGAATCGCGGCTCAATGCCTGAAGCACCGCT 515059
Query 207 GGAGGTGGAGGCCGTGGCTGCCCCAGAGGCGGCCCCCATCAGGGAGAACGACTCTGTCTC 266
|| |||| ||| ||||||| || ||| | || || || |||||||| || ||
Sbjct 515060 CGAAGTGGCGGCTGTGGCTGAGCCTGAGACCGCTCCTATTCAAGAGAACGAGTCGGT--- 515116
Query 267 TACGCCTTCGCCCTCTCCTCACCCTGAGGAACCCCCAGCTaagaaggccaa------gaa 320
| ||||| |||||||| ||||| || ||||| ||||| | || |||
Sbjct 515117 ---GGCTTCG---TCTCCTCATATGGAGGAGCCACCAGCCAAGAAAGTGAAAAAGGTGAA 515170
Query 321 ggctgagaaacccaagaaagagaagaaggagaagaagCCGAAACCCCCTTCCCAAAAGTC 380
||||||||| |||||||| ||| ||| | | ||||| || | || |
Sbjct 515171 GGCTGAGAAGCCCAAGAAGGAGGCAAAG-------ATC--AAACCTCCGAGCTTTAATAC 515221
Query 381 CAAACCGTCGCCCACTGACACCCCAGAGTTGCTTCTGGCGGCTGAGTCCGAGTCTGGTGA 440
||| | |||||| || || | || | |||| || |||| ||| ||||
Sbjct 515222 CAAGCAGTCGCCTACCGATCC------GTCGGCACTGGTAGCC---TCCGGCTCTAGTGA 515272
Query 441 CGAGTATGGGGCCGAACCGGCTCGTTTGTCTTTCCTGTTCTTTGGGGGAAGTGACAACGA 500
| | || | || || ||| | || || |||||||| || |||||||| | ||
Sbjct 515273 TGGCTCTGTTGTAGAGCCTCAACGTATCTCCTTTCTGTTCTTCGGAGGAAGTGATACTGA 515332
Query 501 AAGCACGTTTGTTCCGGATCTGCGACCCTCTGATCTGGATGATCTGCATGAGAACGATCT 560
|||||||| ||||| || | ||||| || ||||| || ||||| ||||| |
Sbjct 515333 CAGCACGTTCCAGCCGGAGTTGAGGCCCTCGGAGTATGATGAACTCCATGAAAACGACAT 515392
Query 561 GCGTCCGTCGCTACAGGCCAAAATGCCGCAATTCTTCTCGCCACCAGTGGTGGAGCACAT 620
||||||||||| |||||||| ||||||| |||||| ||||| || |||| ||| ||||
Sbjct 515393 CCGTCCGTCGCTGCAGGCCAAGATGCCGCTATTCTTTTCGCCGCCTATGGTTGAGAACAT 515452
Query 621 GCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAGTT 662
|||||| ||||||||||| || ||||| |||||||||||
Sbjct 515453 GCGTCGCAGCAGTATCCTTCCCGACCCGAAAGAGTACGAGTT 515494
>PHSO:scaffold_2
Length=11587142
Score = 178 bits (197), Expect = 2e-42
Identities = 266/373 (71%), Gaps = 26/373 (7%)
Strand=Plus/Plus
Query 294 GGAACCCCCAGCTaagaaggccaagaagg-ctgagaaac--ccaagaaagagaagaagga 350
||| || || || |||||||||||||||| ||| || | || || ||| ||||||
Sbjct 5421374 GGAGCCGCCGGCCAAGAAGGCCAAGAAGGTCTGGGAGATGTCCCGGAGAGACAAGAAGCC 5421433
Query 351 gaagaagCCGAAACCCCCTTCCCAAAAGTCCAAACCGTCGCCCACTGACACCCCAGAGTT 410
||| ||||| ||| || | ||||||||||||| | | | | |
Sbjct 5421434 CAAGCAGCCG-----------------GTC-AAGCAGTCGCCCACTGACCCGTCGGCGCT 5421475
Query 411 GCTTCTGGCGGCTGAGTCCGAGTCTGGTGACGAGTATGG-GGCCGAACCGGCTCGTTTGT 469
||| ||||| | | ||| || || | ||||| ||| |||||| ||||| || |||
Sbjct 5421476 GCTGCTGGCCG--GCGTC-GATTCGGACGACGAA-ATGCCGGCCGAGCCGGCGCGCGTGT 5421531
Query 470 CTTTCCTGTTCTTTGGGGGAAGTGACAACGAAAGCACGTTTGTTCCGGATCTGCGACCCT 529
| ||||||||||| ||||| || ||| || ||||| || ||||| || || ||||
Sbjct 5421532 CGTTCCTGTTCTTCGGGGGCAGCGACGTGGACAGCACCTTCCAGCCGGAGCTCCGGCCCT 5421591
Query 530 CTGATCTGGATGATCTGCATGAGAACGATCTGCGTCCGTCGCTACAGGCCAAAATGCCGC 589
| || || || || ||||| |||||||| | || |||||||| |||| ||| |||||||
Sbjct 5421592 CGGAGCTCGACGACCTGCACGAGAACGAGATCCGCCCGTCGCTGCAGGTCAAGATGCCGC 5421651
Query 590 AATTCTTCTCGCCACCAGTGGTGGAGCACATGCGTCGGAGCAGTATCCTGCCGGACCCTC 649
|||||||| || || | |||||| ||||||| || ||||| |||||||| |||||
Sbjct 5421652 TCTTCTTCTCCCCGCCGCTCGTGGAGAACATGCGGCGCAGCAGCATCCTGCCCGACCCGA 5421711
Query 650 GCGAGTACGAGTT 662
|||||||||||
Sbjct 5421712 AGGAGTACGAGTT 5421724
Score = 123 bits (135), Expect = 1e-25
Identities = 168/234 (72%), Gaps = 12/234 (5%)
Strand=Plus/Plus
Query 33 GCCCACCAAACGCAGACACAGTGGCGGCTTCATACGAGCCATCGGAGGCCTCTTCAAGCG 92
||||| ||| |||| ||| | ||| |||| || ||||||||||| |||||||||||
Sbjct 5420891 GCCCAACAAGCGCAAGCACCG---CGGACTCATGCGCGCCATCGGAGGGCTCTTCAAGCG 5420947
Query 93 ACGAAGCAGCGATGCCAACGGACTGTCGGCCCCCAGTGACAGTGAATCCTCGCAGCGAAG 152
|||| ||| || ||| | ||| ||||| ||||| || |||||||||||
Sbjct 5420948 CAAGAGCATCGACGCGGACGACCCCATGGCGCCCAGCGACAGCGAGGCCTCGCAGCGACC 5421007
Query 153 C---ACGTCCCGCTGGTCGCGCTTCTCTTTG------CGCCACTCTCTGCCTGAGGCCCC 203
|| || |||||||| |||| || | ||||| || ||||||||||| ||
Sbjct 5421008 GTCTACCTCGCGCTGGTCCCGCTGGTCGCAGTCGCACCGCCAGTCGCTGCCTGAGGCGCC 5421067
Query 204 CATGGAGGTGGAGGCCGTGGCTGCCCCAGAGGCGGCCCCCATCAGGGAGAACGA 257
||||||||| ||||||||| | || || || ||||||||| |||||||||
Sbjct 5421068 GATGGAGGTGACGGCCGTGGCCGTACCGGAAGCCGCCCCCATCCAGGAGAACGA 5421121
Score = 37.4 bits (40), Expect = 4.7
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 534 TCTGGATGATCTGCATGAGA 553
||||||||||||||||||||
Sbjct 8486330 TCTGGATGATCTGCATGAGA 8486349
>PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:
Scaffold_525, whole genome shotgun sequence
Length=2102221
Score = 118 bits (130), Expect = 2e-24
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 463 CGTTTGTCTTTCCTGTTCTTTGGGGGAAGTGACAACGAAAGCACGTTTGTTCCGGATCTG 522
||| | || ||||| |||||||| ||||||||| ||| | |||||| || || |
Sbjct 1037251 CGTGTCTCATTCCTTTTCTTTGGAGGAAGTGACGTCGACTGTACGTTTCAGCCAGAGTTA 1037310
Query 523 CGACCCTCTGATCTGGATGATCTGCATGAGAACGATCTGCGTCCGTCGCTACAGGCCAAA 582
|||| || || ||||| |||||||||||||||||| | || || || |||| ||||||
Sbjct 1037311 AGACCATCGGAGCTGGACGATCTGCATGAGAACGATATTCGCCCATCATTACAAGCCAAA 1037370
Query 583 ATGCCGCAATTCTTCTCGCCACCAGTGGTGGAGCACATGCGTCGGAGCAGTATCCTGCCG 642
||||||| ||| | |||| || || | || | | ||||| ||||||||| ||||
Sbjct 1037371 ATGCCGCTCTTCCTTCCGCCGCCTTTGCCGAAGAATGTACGTCGCAGCAGTATCTTGCCT 1037430
Query 643 GACCC 647
|| ||
Sbjct 1037431 GATCC 1037435
Score = 53.6 bits (58), Expect = 6e-05
Identities = 58/75 (77%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 130 GACAGTGAATCCTCGCAGCGAAGCACGTCCCGCTGGTCGCGCTTCTCTTTGCGCCACTCT 189
|||||||||||||| ||||| |||| ||||| ||||||| ||| | | || || ||
Sbjct 1036951 GACAGTGAATCCTCACAGCGTCGCACTTCCCGTTGGTCGC-ATTCACAT--CGTCAGTCA 1037007
Query 190 CTGCCTGAGGCCCCC 204
||||||| || |||
Sbjct 1037008 ATGCCTGAAGCTCCC 1037022
>HYAP:scaffold_7 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_7:1:905110:1
REF
Length=905110
Score = 79.7 bits (87), Expect = 2e-12
Identities = 191/287 (67%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 376 AAGTCCAAACCGTCGCCCACTGACACCCCAGAGTTGCTTCTGGCGGCTGAGTCCGAGTCT 435
||| | |||||||||||||| |||| | ||| |||| | || | |||| |||
Sbjct 505157 AAGGCGAAACCGTCGCCCACGGACAGTTCCGAGCTGCTGCGAGCAGAATCGTCC-AGT-- 505213
Query 436 GGTGACGAGTATGGGGCCGAACCGGCTCGTTTGTCTTTCCTGTTCTTTGGGGGAAGTGAC 495
|| |||||| | || ||| || |||| |||||| ||||||| || |||||
Sbjct 505214 GGCAACGAGTCCAACGTGGACCCGTTGCGCGTGTCGTTCCTGATCTTTGGAGGTAGTGAA 505273
Query 496 AACGAAAGCACGTTTGTTCCGGATCTGCGACCCTCTGATCTGGATGATCTGCATGAGAAC 555
|| |||||||| | || || ||| || || || || || |||||| || |
Sbjct 505274 GTGGACAGCACGTTCGAGCCCGAGTTGCACCCGTCGGAATACGACGACGTGCATGGGAGC 505333
Query 556 GATCTGCGTCCGTCGCTACAGGCCAAAATGCCGCAATTCTTCTCGCCACCAGTGGTGGAG 615
|| | || || ||| ||| ||| ||||||| || ||||| | || ||| ||||
Sbjct 505334 GAGATCCGGCCAGTGCTGCAGAACAAGATGCCGCTGTTTTTCTCACTGCCGCTGGCGGAG 505393
Query 616 CACATGCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAGTT 662
| | ||||||| ||||| | | |||| || |||||||||||
Sbjct 505394 CGCTTGCGTCGTAGCAGCGCCAAGTCGGATCCGAAAGAGTACGAGTT 505440
>PYIW:scaffold_2169 piw_scaffold_2169 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_2169:1:5775:1
REF
Length=5775
Score = 43.7 bits (47), Expect = 0.11
Identities = 34/41 (83%), Gaps = 0/41 (0%)
Strand=Plus/Minus
Query 620 TGCGTCGGAGCAGTATCCTGCCGGACCCTCGCGAGTACGAG 660
|||| || ||||| || || ||||||| ||||||||||||
Sbjct 2608 TGCGCCGCAGCAGCATTCTCACGGACCCGCGCGAGTACGAG 2568
>PYVX:scaffold_107 pve_scaffold_107 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_107:1:52321:1
REF
Length=52321
Score = 41.0 bits (44), Expect = 0.38
Identities = 56/78 (72%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 592 TTCTTCTCGCCACCAGTGGTGGAGCACATGCGTCGGAGCAGTATCCTGC---CGGACCCT 648
||||||||| | || | ||| || |||| || ||| |||||| | |||||
Sbjct 44142 TTCTTCTCGGCGCCGCAGTACGAGAACCTGCGCCGCAGCTCCATCCTGGGTGCCGACCCG 44201
Query 649 CGCGAGTACGAGTTCTGA 666
||||||||||| ||||||
Sbjct 44202 CGCGAGTACGAATTCTGA 44219
>PYVX:scaffold_24 pve_scaffold_24 dna:supercontig supercontig:pve_scaffolds_v1:pve_scaffold_24:1:86045:1
REF
Length=86045
Score = 40.1 bits (43), Expect = 1.3
Identities = 31/35 (89%), Gaps = 3/35 (9%)
Strand=Plus/Minus
Query 609 GGTGGAGCACATGC-GTCGGAGCAGT--ATCCTGC 640
|||||||||||||| ||||||| ||| |||||||
Sbjct 51593 GGTGGAGCACATGCTGTCGGAGAAGTCGATCCTGC 51559
>PYIR:scaffold_5 pir_scaffold_5 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_5:1:122177:1
REF
Length=122177
Score = 40.1 bits (43), Expect = 1.3
Identities = 29/34 (85%), Gaps = 0/34 (0%)
Strand=Plus/Minus
Query 528 CTCTGATCTGGATGATCTGCATGAGAACGATCTG 561
|| ||||||||| || ||| | ||||||||||||
Sbjct 4812 CTTTGATCTGGACGACCTGGACGAGAACGATCTG 4779
>PHKE:scaffold_174 scf_22126_174.1_contig_1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_174.1_contig_1:1:71367:1
REF
Length=71367
Score = 40.1 bits (43), Expect = 1.3
Identities = 25/26 (96%), Gaps = 1/26 (4%)
Strand=Plus/Minus
Query 81 CCTCTTCAAGCGACGAAG-CAGCGAT 105
|||||||||||||||||| |||||||
Sbjct 49984 CCTCTTCAAGCGACGAAGCCAGCGAT 49959
>PYUU:scaffold_1308 scf1117875581308 dna:supercontig supercontig:pug:scf1117875581308:1:205558:1
REF
Length=205558
Score = 39.2 bits (42), Expect = 1.3
Identities = 24/26 (92%), Gaps = 0/26 (0%)
Strand=Plus/Minus
Query 637 CTGCCGGACCCTCGCGAGTACGAGTT 662
|||||| ||| |||||||||||||||
Sbjct 62887 CTGCCGCACCGTCGCGAGTACGAGTT 62862
>APIN:scaffold_40 supercont1.40 dna:supercontig supercontig:Apha_inva_NJM9701_V1:supercont1.40:1:550414:1
REF
Length=550414
Score = 39.2 bits (42), Expect = 1.3
Identities = 24/26 (92%), Gaps = 0/26 (0%)
Strand=Plus/Plus
Query 2 TGGAGACGCGCGTCCGTCCATCCGTT 27
||||||||||| |||||||| |||||
Sbjct 454176 TGGAGACGCGCATCCGTCCAGCCGTT 454201
>PYAR:scaffold_3836 par_scaffold_3836 dna:supercontig supercontig:par_scaffolds_v1:par_scaffold_3836:1:2801:1
REF
Length=2801
Score = 38.3 bits (41), Expect = 4.7
Identities = 22/23 (96%), Gaps = 0/23 (0%)
Strand=Plus/Plus
Query 263 TCTCTACGCCTTCGCCCTCTCCT 285
||||| |||||||||||||||||
Sbjct 388 TCTCTCCGCCTTCGCCCTCTCCT 410
>PYAP:scaffold_351 pag1_scaffold_351 dna:supercontig supercontig:pag1_scaffolds_v1:pag1_scaffold_351:1:31055:1
REF
Length=31055
Score = 38.3 bits (41), Expect = 4.7
Identities = 32/40 (80%), Gaps = 6/40 (15%)
Strand=Plus/Minus
Query 58 GGCTTCATACGAGCCATCGG------AGGCCTCTTCAAGC 91
|||||||| || |||||||| ||||||||||||||
Sbjct 4428 GGCTTCATGCGTGCCATCGGCCTTGGAGGCCTCTTCAAGC 4389
>PYAP:scaffold_6 pag1_scaffold_6 dna:supercontig supercontig:pag1_scaffolds_v1:pag1_scaffold_6:1:154828:1
REF
Length=154828
Score = 38.3 bits (41), Expect = 4.7
Identities = 25/28 (89%), Gaps = 0/28 (0%)
Strand=Plus/Minus
Query 414 TCTGGCGGCTGAGTCCGAGTCTGGTGAC 441
||| |||| |||| ||||||||||||||
Sbjct 149982 TCTCGCGGGTGAGACCGAGTCTGGTGAC 149955
>PHKE:scaffold_114 scf_22126_114.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_114.1:1:94743:1
REF
Length=94743
Score = 38.3 bits (41), Expect = 4.7
Identities = 22/23 (96%), Gaps = 0/23 (0%)
Strand=Plus/Plus
Query 531 TGATCTGGATGATCTGCATGAGA 553
|| ||||||||||||||||||||
Sbjct 65775 TGCTCTGGATGATCTGCATGAGA 65797
>PYIR:scaffold_115 pir_scaffold_115 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_115:1:52531:1
REF
Length=52531
Score = 37.4 bits (40), Expect = 4.7
Identities = 25/27 (93%), Gaps = 1/27 (4%)
Strand=Plus/Plus
Query 155 CGTCC-CGCTGGTCGCGCTTCTCTTTG 180
||||| ||||||||||||| |||||||
Sbjct 19180 CGTCCGCGCTGGTCGCGCTGCTCTTTG 19206
>PYIR:scaffold_85 pir_scaffold_85 dna:supercontig supercontig:pir_scaffolds_v1:pir_scaffold_85:1:56510:1
REF
Length=56510
Score = 37.4 bits (40), Expect = 4.7
Identities = 20/20 (100%), Gaps = 0/20 (0%)
Strand=Plus/Plus
Query 489 AAGTGACAACGAAAGCACGT 508
||||||||||||||||||||
Sbjct 56093 AAGTGACAACGAAAGCACGT 56112
>PYAR:scaffold_3415 par_scaffold_3415 dna:supercontig supercontig:par_scaffolds_v1:par_scaffold_3415:1:3328:1
REF
Length=3328
Score = 37.4 bits (40), Expect = 4.7
Identities = 23/25 (92%), Gaps = 0/25 (0%)
Strand=Plus/Plus
Query 159 CCGCTGGTCGCGCTTCTCTTTGCGC 183
||||||||| ||||||||||||||
Sbjct 1753 CCGCTGGTCAAGCTTCTCTTTGCGC 1777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 822685523155
Database: OGOB_genomes.fna
Posted date: Sep 16, 2018 3:46 PM
Number of letters in database: 1,297,559,224
Number of sequences in database: 64,241
Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2