BLAST results for PHALS_10836 - Oomycete Gene Order Browser

Full BLAST raw output including alignments follows below the summary table

Hit Name	Hit Start	Hit End	HSP Length	HSP Score	HSP Significance
PLHA:NW_020187445.1	1038151	1038765	615	1230	0.0
PHCA:scaffold_9	516682	517246	575	128	6e-24
PHPA:scaffold_60	167092	167644	568	86	1e-12
PHSO:scaffold_2	5423238	5423359	122	79	2e-10
PHIF:NW_003303758.1	219296	219509	216	76	7e-10
PHRA:scaffold_35	38340	38465	130	75	3e-09
PHCA:scaffold_52	69428	69454	27	44	0.35
PHCA:scaffold_14	632129	632155	27	44	0.35
PHKE:scaffold_229	52233	52261	29	43	1.2
ALLA:FR824049	147739	147774	36	43	1.2
SADI:scaffold_2	326752	326795	44	42	1.2
PYUU:scaffold_2031	129814	129841	28	41	4.3
HYAP:scaffold_238	8578	8610	33	41	4.3
ALLA:FR824294	28272	28309	38	41	4.3
PYIW:scaffold_8538	156	175	20	40	4.3
PHSO:scaffold_14	994360	994391	34	40	4.3
PHKE:scaffold_311	11480	11499	20	40	4.3
APIN:scaffold_20	966439	966473	35	40	4.3

BLASTN 2.12.0+

Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.

Database: OGOB_genomes.fna
           64,241 sequences; 1,297,559,224 total letters

Query= PHALS_10836

Length=615
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig:...  1110    0.0  
PHCA:scaffold_9 PHYCAscaffold_9                                       116     6e-24
PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 ...  78.8    1e-12
PHSO:scaffold_2                                                       72.5    2e-10
PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 gen...  69.8    7e-10
PHRA:scaffold_35                                                      68.9    3e-09
PHCA:scaffold_52 PHYCAscaffold_52                                     41.0    0.35 
PHCA:scaffold_14 PHYCAscaffold_14                                     41.0    0.35 
PHKE:scaffold_229 scf_22126_229.1 dna:supercontig supercontig:Phy...  40.1    1.2  
ALLA:FR824049 dna:supercontig supercontig:ENA1:FR824049:1:277804:...  40.1    1.2  
SADI:scaffold_2 supercont1.2 dna:supercontig supercontig:Sap_dicl...  39.2    1.2  
PYUU:scaffold_2031 scf1117875582031 dna:supercontig supercontig:p...  38.3    4.3  
HYAP:scaffold_238 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_...  38.3    4.3  
ALLA:FR824294 dna:supercontig supercontig:ENA1:FR824294:1:38092:1...  38.3    4.3  
PYIW:scaffold_8538 piw_scaffold_8538 dna:supercontig supercontig:...  37.4    4.3  
PHSO:scaffold_14                                                      37.4    4.3  
PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:Phy...  37.4    4.3  
APIN:scaffold_20 supercont1.20 dna:supercontig supercontig:Apha_i...  37.4    4.3

>PLHA:NW_020187445.1 Plasmopara halstedii genome assembly, contig: 
Scaffold_525, whole genome shotgun sequence
Length=2102221

 Score = 1110 bits (1230),  Expect = 0.0
 Identities = 615/615 (100%), Gaps = 0/615 (0%)
 Strand=Plus/Plus

Query  1        ATGTCCCGATTTATTCGTATCTTATGGGATCTTGTATGCCAGCCATTCGAATACTGTAGG  60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038151  ATGTCCCGATTTATTCGTATCTTATGGGATCTTGTATGCCAGCCATTCGAATACTGTAGG  1038210

Query  61       AATTGCTGTGACGTATTGGACCCTGCCTATTATCGCAAAATGTCACCTGGAGGACGAAGA  120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038211  AATTGCTGTGACGTATTGGACCCTGCCTATTATCGCAAAATGTCACCTGGAGGACGAAGA  1038270

Query  121      AATCCGCAAATGTTCAACTGCTGGGATAATGACAAGAACACTCTCACTCCTTCTTATCCC  180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038271  AATCCGCAAATGTTCAACTGCTGGGATAATGACAAGAACACTCTCACTCCTTCTTATCCC  1038330

Query  181      ACGTCATCATTTCCAACACTTTCAAGTAGTAACTTAGAGTATTCATGTCGAGCAAACGAC  240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038331  ACGTCATCATTTCCAACACTTTCAAGTAGTAACTTAGAGTATTCATGTCGAGCAAACGAC  1038390

Query  241      AACAAATTTATTACACTGTCCACATCAAGATCGAGATCTGTTTCCAGCACGCCTTCAGAG  300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038391  AACAAATTTATTACACTGTCCACATCAAGATCGAGATCTGTTTCCAGCACGCCTTCAGAG  1038450

Query  301      AGCGCACATGAGGAAGAAGGCGAGAACCAGTTGCACTTCTTGTTTTATGGTGGCAGTGAC  360
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038451  AGCGCACATGAGGAAGAAGGCGAGAACCAGTTGCACTTCTTGTTTTATGGTGGCAGTGAC  1038510

Query  361      TCTTTATCGCCAAAGGCAGTCGGGAAAAGGTATCGCAGGGATATCATTTCCGATTGCCAG  420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038511  TCTTTATCGCCAAAGGCAGTCGGGAAAAGGTATCGCAGGGATATCATTTCCGATTGCCAG  1038570

Query  421      GAGCCCACAAGTCCAGTGGTGTCAATCGAATCGCCTCGAATCGATCATAAGATGCCGTGC  480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038571  GAGCCCACAAGTCCAGTGGTGTCAATCGAATCGCCTCGAATCGATCATAAGATGCCGTGC  1038630

Query  481      TTTTTCTCGTCTACGATAGCTCCGTTGCAATTCCCAATGTCTGACTCAATTTACTCGGCA  540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038631  TTTTTCTCGTCTACGATAGCTCCGTTGCAATTCCCAATGTCTGACTCAATTTACTCGGCA  1038690

Query  541      AACCTCTTGGGAGATATCGATCAGCAAGGCCAACGAAGCGGTACTGGACACTGCAACATG  600
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1038691  AACCTCTTGGGAGATATCGATCAGCAAGGCCAACGAAGCGGTACTGGACACTGCAACATG  1038750

Query  601      CGACTCGTCATGTAA  615
                |||||||||||||||
Sbjct  1038751  CGACTCGTCATGTAA  1038765

>PHCA:scaffold_9 PHYCAscaffold_9
Length=1114135

 Score = 116 bits (128),  Expect = 6e-24
 Identities = 374/575 (65%), Gaps = 38/575 (7%)
 Strand=Plus/Plus

Query  2       TGTCCCGATTTATTCGTATCTTATGGGATCTTGTATGCCAGCCATTCGAATACTGTAGGA  61
               ||||| ||||  | ||   | | ||||| || ||  | |||||||||||| |||| | ||
Sbjct  516682  TGTCCGGATTCTTCCGCTACATTTGGGACCTCGTGCGGCAGCCATTCGAAGACTGCACGA  516741

Query  62      ATTGCTGTGACGTATTGGACCCTGCCTATTATCGCAAAATGTCACCTGGAGGACGAAGAA  121
                 |||||||||||  ||||||| | ||| || ||||| | ||| |||||||  |||||||
Sbjct  516742  GCTGCTGTGACGTTCTGGACCCGGACTACTACCGCAAGACGTCGCCTGGAGTGCGAAGAA  516801

Query  122     ATCCGCAAATGTTCAACTGCTGGGA-TA--ATGACAAGAACACTCTCACTCCTTCTTATC  178
                |||||| ||||||||| ||||||| ||  | | ||| |     ||||| || ||  |||
Sbjct  516802  GTCCGCAGATGTTCAACCGCTGGGAGTACGACGTCAAAATGGAGCTCACACCGTCAAATC  516861

Query  179     CCACGTCATCATTTCCAACACTTTCAAGTAGTAACTTAGAGTATTCA----TGTCGA---  231
               || ||    ||   ||  || ||  ||| || ||| ||||  |  ||     |||||   
Sbjct  516862  CCCCG---ACACGCCCGCCATTTCAAAGCAGCAACGTAGACAAAACACCGGAGTCGAGGG  516918

Query  232     ----GCAAACGACAACAAATTTATTACACTGTCCACATCAAGATCGAGATCTGTTTCCAG  287
                   |||  ||| |||   | |||  ||  |||    ||| ||||  |||||  | | | 
Sbjct  516919  AGGTGCAGTCGAAAAC---TCTAT--CATCGTCAGGGTCACGATCAGGATCTAGTGCGAA  516973

Query  288     CACGCCTTCAGAGAGCGCACATGAGGAAGAAGGCGAGAACCAGTTGCACTTCTTGTTTTA  347
                 | || |   |   | || | ||||| || | ||||   ||  |||| |||||||| ||
Sbjct  516974  TTCCCCCTTGAATTACTCATACGAGGAGGAGGACGAGCGGCAAGTGCAGTTCTTGTTCTA  517033

Query  348     TGGTGGCAGTGACTCTTTATCGCCAAAGGCAGTCGG------------GAAAAGGTATCG  395
                || ||||| ||  ||  | | || ||  |||| ||            |||  |||||||
Sbjct  517034  CGGAGGCAGCGATCCTCCAACACCCAATTCAGTAGGAGGACTCCACCAGAACGGGTATCG  517093

Query  396     CAGGGATATCATTTCCGATTGCCAGGAGCCCACAAGTCCAGTGGTGTCAATCGAATCGCC  455
               ||| ||||| || ||| | |    ||||||||  || ||||  | ||| ||||| || ||
Sbjct  517094  CAGCGATATGATCTCCAACTATGTGGAGCCCATGAGCCCAGCAGCGTCGATCGAGTCACC  517153

Query  456     TCGAATCGATCATAAGATGCCGTGCTTTTTCTCGTCTACG--ATAGCTCCGTTGCAATTC  513
                || ||    ||| | ||||||||||| |||||| | |||  ||| | ||| | || |  
Sbjct  517154  GCGTATTAGCCATGAAATGCCGTGCTTCTTCTCG-CCACGGAATA-CGCCGATTCAGTCT  517211

Query  514     CCAATGTCTGACTCAATTTACTCGGCAAACCTCTT  548
               || ||||| |   | || |||||| |  |||||||
Sbjct  517212  CCGATGTCAGCGCCGATCTACTCGCCCCACCTCTT  517246

 Score = 41.0 bits (44),  Expect = 0.35
 Identities = 25/27 (93%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  224     CATGTCGAGCAAACGACAACAAATTTA  250
               ||| |||||||||||||||||||| ||
Sbjct  446470  CATATCGAGCAAACGACAACAAATATA  446496

>PHPA:scaffold_60 NW_008649046.1 Phytophthora parasitica INRA-310 
unplaced genomic scaffold supercont2.60, whole genome shotgun 
sequence
Length=386225

 Score = 78.8 bits (86),  Expect = 1e-12
 Identities = 358/568 (63%), Gaps = 40/568 (7%)
 Strand=Plus/Minus

Query  6       CCGATTTATTCG-TATCTTATGGGATCTTGTATGCCAGCCATTCGAATACTGTAGGAATT  64
               ||||||| |||  || | | |||||  | || || |  || || ||  |||| |  |  |
Sbjct  167644  CCGATTTCTTCCATAGCGTTTGGGACTTCGTGTGTCGACCTTTTGAGGACTGCACAAGCT  167585

Query  65      GCTGTGACGTATTGGACCCTGCCTATTATCGCAAAATGTCACCTGGAGGACGAAGAAATC  124
               |||| || ||| | ||||| | ||| || ||||| | ||| || || |  || ||   ||
Sbjct  167584  GCTGCGATGTACTAGACCCAGACTACTACCGCAAGACGTCGCCCGGTGTCCGCAGGTCTC  167525

Query  125     CGCAAATGTTCAACTGCTGGGATAATGAC---AAGAACACTCTCACTCCTTCTTATCCCA  181
               |||| ||||||||| |||||||  | |||   ||| |||   ||||||| ||    ||  
Sbjct  167524  CGCAGATGTTCAACCGCTGGGAGCACGACGTCAAGTACAACATCACTCCGTCCCGCCCTC  167465

Query  182     CGTCATCATTTCCAACACTTTCAAGTAGTAACTTAGAGTATTCATGTCGAGCAAACGACA  241
               | || ||  ||||  || |  | || ||| |  |||              |||   || |
Sbjct  167464  CATCGTCGCTTCCCCCATTCGCGAGCAGTCAGGTAG--------------GCACCAGAGA  167419

Query  242     ACA--AATTTATTACACTGTCCACATCAAGATCGAGATCTGTTTCCAGCACG------CC  293
                ||  |||  |  ||||||||  | ||| ||||||| || |  || | | ||      ||
Sbjct  167418  GCATCAATCGAAGACACTGTCTTCTTCAGGATCGAGGTCGGGATCAAACTCGGACTCGCC  167359

Query  294     TTCAGAGAGCGCACATGAGGAAGAAGGCGAGAACCAGTTGCACTTCTTGTTTTATGGTGG  353
                ||  |   | |  ||||||| || |  ||||  ||| |||| |||||||| || || ||
Sbjct  167358  ATCCAATTACTCGTATGAGGAGGAGGATGAGAGGCAGGTGCAGTTCTTGTTCTACGGCGG  167299

Query  354     CAGTGACTCTTTATCGCCAAAGGCAGTCGG------------GAAAAGGTATCGCAGGGA  401
               ||| ||  |     |||| | | |||  ||            |||  | |||||||| ||
Sbjct  167298  CAGCGATCCCCCCACGCCCACGTCAGCAGGAGGACTTTACTCGAACGGATATCGCAGCGA  167239

Query  402     TATCATTTCCGATTGCCAGGAGCCCACAAGTCCAGTGGTGTCAATCGAATCGCCTCGAAT  461
               ||| || ||| ||| |  ||| ||||  || |||| || ||| || || || || |||||
Sbjct  167238  TATGATCTCCAATTACGTGGAACCCATGAGCCCAGCGGCGTCGATTGAGTCACCACGAAT  167179

Query  462     CGATCATAAGATGCCGTGCTTTTTCTCGTCTA-CGATAGCTCCGTTGCAATTCCCAATGT  520
                 | ||  ||||||||||||| |||||| | |  |||| | ||  | || |  |||||||
Sbjct  167178  TAACCACGAGATGCCGTGCTTCTTCTCGCCAAGAGATA-CACCACTACAGTCTCCAATGT  167120

Query  521     CTGACTCAATTTACTCGGCAAACCTCTT  548
               | |   | || |||||  |  |||||||
Sbjct  167119  CAGCACCGATCTACTCCCCGCACCTCTT  167092

>PHSO:scaffold_2
Length=11587142

 Score = 72.5 bits (79),  Expect = 2e-10
 Identities = 89/122 (73%), Gaps = 0/122 (0%)
 Strand=Plus/Plus

Query  25       TGGGATCTTGTATGCCAGCCATTCGAATACTGTAGGAATTGCTGTGACGTATTGGACCCT  84
                |||||||| ||  ||   || |||||  |||| | ||  ||||| || ||  ||||||| 
Sbjct  5423238  TGGGATCTCGTGCGCAGTCCGTTCGAGGACTGCACGAGCTGCTGCGATGTCCTGGACCCC  5423297

Query  85       GCCTATTATCGCAAAATGTCACCTGGAGGACGAAGAAATCCGCAAATGTTCAACTGCTGG  144
                |  || || ||||| | ||| || ||||  || || |  ||||||||||||||| |||||
Sbjct  5423298  GATTACTACCGCAAGACGTCGCCCGGAGTGCGCAGGACGCCGCAAATGTTCAACCGCTGG  5423357

Query  145      GA  146
                ||
Sbjct  5423358  GA  5423359

 Score = 39.2 bits (42),  Expect = 1.2
 Identities = 39/51 (76%), Gaps = 0/51 (0%)
 Strand=Plus/Plus

Query  442      TCAATCGAATCGCCTCGAATCGATCATAAGATGCCGTGCTTTTTCTCGTCT  492
                || ||||  ||||| || |||   ||  ||||||||||||| |||||| ||
Sbjct  5423706  TCGATCGCGTCGCCGCGCATCAGCCACGAGATGCCGTGCTTCTTCTCGCCT  5423756

>PHIF:NW_003303758.1 Phytophthora infestans T30-4 supercont1.1 
genomic scaffold, whole genome shotgun sequence
Length=6928287

 Score = 69.8 bits (76),  Expect = 7e-10
 Identities = 148/216 (69%), Gaps = 4/216 (2%)
 Strand=Plus/Plus

Query  389     GGTATCGCAGGGATATCATTTCCGATTGCCAGGAGCCCACAAGTCCAGTGGTGTCAATCG  448
               |||||||||| || || || ||  ||| |  ||| || |  || || |  | ||| || |
Sbjct  219296  GGTATCGCAGCGACATGATCTCTAATTACGTGGAACCTATGAGCCCGGCAGCGTCGATTG  219355

Query  449     AATCGCCTCGAATCGATCATAAGATGCCGTGCTTTTTCTCGTCTACGATAGCTCCGTTGC  508
               |||| ||||||||    ||| ||||||||||||| |||||| | | ||   | ||| | |
Sbjct  219356  AATCACCTCGAATTAGCCATGAGATGCCGTGCTTCTTCTCGCCGAGGAACACACCGCTAC  219415

Query  509     AATTCCCAATGTCTGACTCAATTTACTCGGCAAACCTCTTGGGAGATAT-CGATCAGC-A  566
               | |  |||||||| |   | || |||||  |  | |||||   | || | ||| |||| |
Sbjct  219416  AGTCTCCAATGTCAGCACCGATCTACTCTCCGCATCTCTT-TAAAATCTCCGAACAGCGA  219474

Query  567     AGGCCAACGAAGCGGTACTGGACACTGCAACATGCG  602
               | | |  ||| || |||| ||  ||| |||||||||
Sbjct  219475  ATGTC-GCGACGCAGTACAGGTTACTACAACATGCG  219509

>PHRA:scaffold_35
Length=466101

 Score = 68.9 bits (75),  Expect = 3e-09
 Identities = 95/130 (73%), Gaps = 5/130 (4%)
 Strand=Plus/Minus

Query  420    GGAGCCCACAAGTCCAGTGGTGTCAATCGAATCGCCTCGAATCGATCATAAGATGCCGTG  479
              ||||||||  ||||| | ||  |   ||| |||||| || ||  | ||  ||||||||||
Sbjct  38465  GGAGCCCATTAGTCCGGCGGCTT---TCGCATCGCCACGGATAAACCACGAGATGCCGTG  38409

Query  480    CTTTTTCTCGTCTACGATAG-CTCCGTTGCAATTCCCAATGTCTGACTCAATTTACTCGG  538
              ||| |||||| |  ||| |  | |||  ||||| ||| |||||||   ||||||||||| 
Sbjct  38408  CTTCTTCTCGCCG-CGAAATACGCCGGCGCAATCCCCGATGTCTGCGCCAATTTACTCGC  38350

Query  539    CAAACCTCTT  548
              |  |||||||
Sbjct  38349  CCCACCTCTT  38340

 Score = 65.3 bits (71),  Expect = 3e-08
 Identities = 82/113 (73%), Gaps = 0/113 (0%)
 Strand=Plus/Minus

Query  25     TGGGATCTTGTATGCCAGCCATTCGAATACTGTAGGAATTGCTGTGACGTATTGGACCCT  84
              ||||||||  |  | | |||||| ||  | || | ||  ||||| |||||| ||||||| 
Sbjct  38851  TGGGATCTCCTGCGTCGGCCATTTGAGGAATGCACGAGCTGCTGCGACGTACTGGACCCC  38792

Query  85     GCCTATTATCGCAAAATGTCACCTGGAGGACGAAGAAATCCGCAAATGTTCAA  137
                ||| || ||||| | ||| || || |  || || | |||||||||||||||
Sbjct  38791  AACTACTACCGCAAGACGTCGCCCGGCGTGCGCAGGAGTCCGCAAATGTTCAA  38739

>PHCA:scaffold_52 PHYCAscaffold_52
Length=444141

 Score = 41.0 bits (44),  Expect = 0.35
 Identities = 25/27 (93%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  224    CATGTCGAGCAAACGACAACAAATTTA  250
              ||| |||||||||||||||||||| ||
Sbjct  69428  CATATCGAGCAAACGACAACAAATATA  69454

>PHCA:scaffold_14 PHYCAscaffold_14
Length=1100894

 Score = 41.0 bits (44),  Expect = 0.35
 Identities = 25/27 (93%), Gaps = 0/27 (0%)
 Strand=Plus/Plus

Query  224     CATGTCGAGCAAACGACAACAAATTTA  250
               ||| |||||||||||||||||||| ||
Sbjct  632129  CATATCGAGCAAACGACAACAAATATA  632155

>PHKE:scaffold_229 scf_22126_229.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_229.1:1:56681:1 
REF
Length=56681

 Score = 40.1 bits (43),  Expect = 1.2
 Identities = 26/29 (90%), Gaps = 0/29 (0%)
 Strand=Plus/Plus

Query  188    CATTTCCAACACTTTCAAGTAGTAACTTA  216
              ||| |||||||||||| ||||||||| ||
Sbjct  52233  CATCTCCAACACTTTCCAGTAGTAACATA  52261

>ALLA:FR824049 dna:supercontig supercontig:ENA1:FR824049:1:277804:1 
REF
Length=277804

 Score = 40.1 bits (43),  Expect = 1.2
 Identities = 31/36 (86%), Gaps = 1/36 (3%)
 Strand=Plus/Plus

Query  107     CTGGAGGACGAAGAAATCCGCAAATGT-TCAACTGC  141
               |||||||||||||||| | | ||||||  |||||||
Sbjct  147739  CTGGAGGACGAAGAAAGCAGAAAATGTGGCAACTGC  147774

>SADI:scaffold_2 supercont1.2 dna:supercontig supercontig:Sap_diclina_VS20_V1:supercont1.2:1:1527201:1 
REF
Length=1527201

 Score = 39.2 bits (42),  Expect = 1.2
 Identities = 35/44 (80%), Gaps = 4/44 (9%)
 Strand=Plus/Plus

Query  571     CAACGAAGCGGTACTGGA----CACTGCAACATGCGACTCGTCA  610
               ||| || || || |||||    ||||||| ||||||||||||||
Sbjct  326752  CAAAGATGCCGTGCTGGATCATCACTGCAGCATGCGACTCGTCA  326795

>PYUU:scaffold_2031 scf1117875582031 dna:supercontig supercontig:pug:scf1117875582031:1:1316296:1 
REF
Length=1316296

 Score = 38.3 bits (41),  Expect = 4.3
 Identities = 25/28 (89%), Gaps = 0/28 (0%)
 Strand=Plus/Minus

Query  152     ACAAGAACACTCTCACTCCTTCTTATCC  179
               |||| |||||||||||| |||||| |||
Sbjct  129841  ACAACAACACTCTCACTGCTTCTTCTCC  129814

>HYAP:scaffold_238 dna:scaffold scaffold:HyaAraEmoy2_2.0:scaffold_238:1:72663:1 
REF
Length=72663

 Score = 38.3 bits (41),  Expect = 4.3
 Identities = 28/33 (85%), Gaps = 0/33 (0%)
 Strand=Plus/Plus

Query  572   AACGAAGCGGTACTGGACACTGCAACATGCGAC  604
             |||||||||||||| | | || |||||| ||||
Sbjct  8578  AACGAAGCGGTACTTGTCGCTTCAACATTCGAC  8610

>ALLA:FR824294 dna:supercontig supercontig:ENA1:FR824294:1:38092:1 
REF
Length=38092

 Score = 38.3 bits (41),  Expect = 4.3
 Identities = 31/38 (82%), Gaps = 0/38 (0%)
 Strand=Plus/Plus

Query  205    AGTAGTAACTTAGAGTATTCATGTCGAGCAAACGACAA  242
              ||| || | || || ||||||||||||| ||||| |||
Sbjct  28272  AGTTGTTATTTTGATTATTCATGTCGAGGAAACGCCAA  28309

>PYIW:scaffold_8538 piw_scaffold_8538 dna:supercontig supercontig:piw_scaffolds_v1:piw_scaffold_8538:1:444:1 
REF
Length=444

 Score = 37.4 bits (40),  Expect = 4.3
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Plus

Query  298  GAGAGCGCACATGAGGAAGA  317
            ||||||||||||||||||||
Sbjct  156  GAGAGCGCACATGAGGAAGA  175

>PHSO:scaffold_14
Length=1806347

 Score = 37.4 bits (40),  Expect = 4.3
 Identities = 29/34 (85%), Gaps = 2/34 (6%)
 Strand=Plus/Minus

Query  278     CTGTTTCCAGCACGCCTTCAGAGAGCGCACATGA  311
               |||||||||||||||| ||  || ||| ||||||
Sbjct  994391  CTGTTTCCAGCACGCCATC--AGTGCGTACATGA  994360

>PHKE:scaffold_311 scf_22126_311.1 dna:supercontig supercontig:PhyKer238_432v1:scf_22126_311.1:1:43504:1 
REF
Length=43504

 Score = 37.4 bits (40),  Expect = 4.3
 Identities = 20/20 (100%), Gaps = 0/20 (0%)
 Strand=Plus/Minus

Query  470    AGATGCCGTGCTTTTTCTCG  489
              ||||||||||||||||||||
Sbjct  11499  AGATGCCGTGCTTTTTCTCG  11480

>APIN:scaffold_20 supercont1.20 dna:supercontig supercontig:Apha_inva_NJM9701_V1:supercont1.20:1:1003253:1 
REF
Length=1003253

 Score = 37.4 bits (40),  Expect = 4.3
 Identities = 29/35 (83%), Gaps = 0/35 (0%)
 Strand=Plus/Plus

Query  295     TCAGAGAGCGCACATGAGGAAGAAGGCGAGAACCA  329
               ||||  ||||||||||| || |||||||| | |||
Sbjct  966439  TCAGGAAGCGCACATGACGAGGAAGGCGACATCCA  966473

Lambda      K        H
   0.634    0.408    0.912

Gapped
Lambda      K        H
   0.625    0.410    0.780

Effective search space used: 756611567752

  Database: OGOB_genomes.fna
    Posted date:  Sep 16, 2018  3:46 PM
  Number of letters in database: 1,297,559,224
  Number of sequences in database:  64,241

Matrix: blastn matrix 2 -3
Gap Penalties: Existence: 5, Extension: 2