BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: blastdb
319,881 sequences; 135,609,681 total letters
Query= CCI44113
Length=232
Score E
Sequences producing significant alignments: (Bits) Value
CCI44113 471 2e-170
PYIR_21527 33.9 0.72
PYIR_13641 33.9 0.82
PHYSO_476634 32.7 2.2
HYAP_04544 30.4 10.0
>CCI44113
Length=232
Score = 471 bits (1211), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 232/232 (100%), Positives = 232/232 (100%), Gaps = 0/232 (0%)
Query 1 MQEKFPCVSRWMQQDNSCLKEKHSRVSKISAHLILLNDAEQNLVHIQDQVGADNLTRSIS 60
MQEKFPCVSRWMQQDNSCLKEKHSRVSKISAHLILLNDAEQNLVHIQDQVGADNLTRSIS
Sbjct 1 MQEKFPCVSRWMQQDNSCLKEKHSRVSKISAHLILLNDAEQNLVHIQDQVGADNLTRSIS 60
Query 61 SFSLVVKHGVDNLVVDGDTFASSDSSSEKFVDCVAKVEGPADSFIIASTSFCKAISDRTA 120
SFSLVVKHGVDNLVVDGDTFASSDSSSEKFVDCVAKVEGPADSFIIASTSFCKAISDRTA
Sbjct 61 SFSLVVKHGVDNLVVDGDTFASSDSSSEKFVDCVAKVEGPADSFIIASTSFCKAISDRTA 120
Query 121 LALSLQIRNNSSLIWSLFPSNHPQTRPRNSFGIPAKQSATTDFISLGIGRGKISSIQVSV 180
LALSLQIRNNSSLIWSLFPSNHPQTRPRNSFGIPAKQSATTDFISLGIGRGKISSIQVSV
Sbjct 121 LALSLQIRNNSSLIWSLFPSNHPQTRPRNSFGIPAKQSATTDFISLGIGRGKISSIQVSV 180
Query 181 KDLLILLNLTRFRSSFRVFDNLFRCFRVSPLMTVDHVCALSKEILELFTMHV 232
KDLLILLNLTRFRSSFRVFDNLFRCFRVSPLMTVDHVCALSKEILELFTMHV
Sbjct 181 KDLLILLNLTRFRSSFRVFDNLFRCFRVSPLMTVDHVCALSKEILELFTMHV 232
>PYIR_21527
Length=463
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/160 (27%), Positives = 62/160 (39%), Gaps = 31/160 (19%)
Query 11 WMQQDNSCLKEKHSRVSKISAHLI-----LLNDAEQNLVHIQDQVGADNLTRSISSFSLV 65
WMQQD EK ++ +K L+ ++ND +L DQ L S++ F
Sbjct 20 WMQQDT----EKQTKENKAMQELLHGVISIVNDVVADLTPPSDQHDGVRLAASVNRFIPD 75
Query 66 VKH-------GVDNLVVDGDTF------ASSDSSSEKF-------VDCVAKVEGPADSFI 105
VKH VD LV + +T A+ DS E DC AKV D
Sbjct 76 VKHWKELSIDKVDKLVSEWETVLLSWREAALDSKKEVRESCGLFQEDCDAKVRQICDLHE 135
Query 106 IASTSFCKAISDRTALALSLQI--RNNSSLIWSLFPSNHP 143
+ + K I D T Q+ + + IW+ + P
Sbjct 136 LERAALTKKILDLTTFTEQQQMLCEDYAGGIWNAAARSQP 175
>PYIR_13641
Length=546
Score = 33.9 bits (76), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query 32 HLILLNDAEQNLVHIQDQVGADNLTRSISSFSLVVKHGVDNLVVDGDTFASSDSSSEKFV 91
H +L DAE+ L I Q GA+ S S H VD V+GD S S+K+V
Sbjct 323 HPLLPEDAEKGLARISLQAGAET---SYVSHPTTPGH-VDATAVNGDV-KPQQSFSDKYV 377
Query 92 DCVAKVEGPADSFIIASTSFCKAISDRTALALSLQ 126
+ VE A +I A F A +D LA++ +
Sbjct 378 KSLKYVEPVA--WITAVGDFFHAFTDGVVLAVAFK 410
>PHYSO_476634
Length=1230
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 34/75 (45%), Gaps = 5/75 (7%)
Query 58 SISSFSLVVKHGVDNLVVDGDTFASSDSSSEKFVDCVAKVEGPADSFIIASTSFCKAISD 117
SIS SL KHG D F S + SE F C K +GP I S + A S
Sbjct 998 SISQVSLQDKHGGVFCPSDTVGFLLSVAPSELFFACPQKSDGP-----IRSLARLTAGSA 1052
Query 118 RTALALSLQIRNNSS 132
RTAL S RN +S
Sbjct 1053 RTALPRSPTSRNEAS 1067
>HYAP_04544
Length=464
Score = 30.4 bits (67), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (48%), Gaps = 4/80 (5%)
Query 19 LKEKHSRVSKISAHLILLNDAEQNLVHIQDQVGADNLTRSISSFSLVVKHGVDNLVVDGD 78
+ ++ + +++ H L D+E VH D+V DN + I + V + DG+
Sbjct 55 MGQQFTNLTRHIRHFRLATDSETMQVHRMDEVVIDNHEKGIPVWGGVHR----ETAPDGN 110
Query 79 TFASSDSSSEKFVDCVAKVE 98
S+ +S+ F D +AK E
Sbjct 111 VHYSTPLTSKTFDDFMAKYE 130
Lambda K H a alpha
0.322 0.133 0.385 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 11973961080
Database: blastdb
Posted date: Feb 23, 2018 11:26 PM
Number of letters in database: 135,609,681
Number of sequences in database: 319,881
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40