BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: blastdb
319,881 sequences; 135,609,681 total letters
Query= PHYCA_14729
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
PHYCA_14729 289 2e-100
PHYCA_20546 264 3e-90
PHYCA_16319 224 3e-74
PHYCA_21815 46.6 2e-05
PPTG_05661 31.2 2.8
PITG_00603 30.0 5.7
PYAR_23203 30.0 8.5
PYIW_19782 30.0 9.7
>PHYCA_14729
Length=179
Score = 289 bits (740), Expect = 2e-100, Method: Compositional matrix adjust.
Identities = 179/179 (100%), Positives = 179/179 (100%), Gaps = 0/179 (0%)
Query 1 MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTdelledakerdeeraaVYLATVHPAMAS 60
MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTDELLEDAKERDEERAAVYLATVHPAMAS
Sbjct 1 MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTDELLEDAKERDEERAAVYLATVHPAMAS 60
Query 61 ARFSWeereeaqrrrsaeLKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGTVTV 120
ARFSWEEREEAQRRRSAELKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGTVTV
Sbjct 61 ARFSWEEREEAQRRRSAELKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGTVTV 120
Query 121 ENEVTSEYENGTVEVLSGTENDSKNDGRYGNSSVAAVDTSSGSDELVKHPNRKGKKNDG 179
ENEVTSEYENGTVEVLSGTENDSKNDGRYGNSSVAAVDTSSGSDELVKHPNRKGKKNDG
Sbjct 121 ENEVTSEYENGTVEVLSGTENDSKNDGRYGNSSVAAVDTSSGSDELVKHPNRKGKKNDG 179
>PHYCA_20546
Length=192
Score = 264 bits (674), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/179 (94%), Positives = 172/179 (96%), Gaps = 0/179 (0%)
Query 1 MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTdelledakerdeeraaVYLATVHPAMAS 60
MKLDGPDEENLTT +EATGTVIVGSAVVTDWTDELLEDAKERDEERAAVYLATVHPAMAS
Sbjct 1 MKLDGPDEENLTTVNEATGTVIVGSAVVTDWTDELLEDAKERDEERAAVYLATVHPAMAS 60
Query 61 ARFSWeereeaqrrrsaeLKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGTVTV 120
ARFSWEEREEAQRRRSAELKRRILELERSGEGANRLRTGEGATVTDEAK LDEDSGTVT+
Sbjct 61 ARFSWEEREEAQRRRSAELKRRILELERSGEGANRLRTGEGATVTDEAKALDEDSGTVTI 120
Query 121 ENEVTSEYENGTVEVLSGTENDSKNDGRYGNSSVAAVDTSSGSDELVKHPNRKGKKNDG 179
E+EVTSEYE+GTVEVLSGT NDSKNDGR GN SVAAVDTSSGSDELVKHPN K KKNDG
Sbjct 121 EDEVTSEYESGTVEVLSGTGNDSKNDGRNGNGSVAAVDTSSGSDELVKHPNAKDKKNDG 179
>PHYCA_16319
Length=206
Score = 224 bits (570), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/206 (75%), Positives = 162/206 (79%), Gaps = 27/206 (13%)
Query 1 MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTdelledakerdeeraaVYLATVHPAMAS 60
MK DGPDEENLTTFDEATGTVIVGS VVTDWTDELLEDA+ERD ERAAVYLATVHPAMAS
Sbjct 1 MKTDGPDEENLTTFDEATGTVIVGSTVVTDWTDELLEDARERDAERAAVYLATVHPAMAS 60
Query 61 ARFSWeereeaqrrrsaeLKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGTVTV 120
ARFSWEEREEAQRRRSAELKRRILELERS EGANRLRTGEGATVTD A+ LDEDSGTVT
Sbjct 61 ARFSWEEREEAQRRRSAELKRRILELERSKEGANRLRTGEGATVTDGAETLDEDSGTVTS 120
Query 121 ENEVTSEYENGTVEVLSGTENDSKNDGRYGNSSVAAVDTSS------------------- 161
E+EV E +GTVEVLS ++D KNDG GNSS+AAVDTSS
Sbjct 121 ESEVIPEDVSGTVEVLSALDDDGKNDGGNGNSSIAAVDTSSSGDTDGNGNTSCGNGTDKE 180
Query 162 --------GSDELVKHPNRKGKKNDG 179
GSDELVKHPN KGKKNDG
Sbjct 181 LQLSRRAPGSDELVKHPNGKGKKNDG 206
>PHYCA_21815
Length=303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 15/118 (13%)
Query 1 MKLDGPDEENLTTFDEATGTVIVGSAVVTDWTdelledakerdeeraaVYLATVHPAM-A 59
MK+ G D+E+LTT D T TV+VG V DW DE+ DA++RDEE+AAV+ T A
Sbjct 170 MKVGGSDDEDLTTVDLTTRTVVVGKTRVLDWMDEMQYDAEQRDEEQAAVFPETNEKTCDA 229
Query 60 SARFSWeereeaqrrrsaeLKRRILELERSGEGANRLRTGEGATVTDEAKVLDEDSGT 117
R W E+ R LEL G+ N L GEGATV V +ED GT
Sbjct 230 DDRPDWCEK-----------PRECLEL---GKAQNSLNLGEGATVVGGTVVGNEDGGT 273
>PPTG_05661
Length=253
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/61 (38%), Positives = 34/61 (56%), Gaps = 7/61 (11%)
Query 3 LDGPDEENLTTFDEATGTVIVGSAVVTDWTdelledakerdeeraaVYLATVHPAMASAR 62
LDG +E+ + + A+G +W + +D D+ERAA Y+ TV PAMASA+
Sbjct 31 LDGHNEKAVPRYSSASGEP-------HEWVKRMKKDEASYDKERAARYVMTVRPAMASAK 83
Query 63 F 63
F
Sbjct 84 F 84
>PITG_00603
Length=180
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/86 (33%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query 49 VYLATVHPAMASARFSWeereeaqrrrsaeL--KRRILELERSGEGANRLRTGEGATVTD 106
++++TV PAMASAR+ + + Q+ L KR ++GEGA L + T
Sbjct 89 IHVSTVRPAMASARYKYAASADQQQNEGCGLDGKR------QTGEGAY-LSAPQSETNDG 141
Query 107 EAKVLDEDSGTVTVENEVTSEYENGT 132
E K + E S + V E +E E+ T
Sbjct 142 EVKSIGELSVSTVVRRETMAEAEDTT 167
>PYAR_23203
Length=802
Score = 30.0 bits (66), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query 91 EGANRLRTGEGATVTDEAKVLDEDSGTVTVENEVTSEYENGTVEVLSGTENDSKNDGRYG 150
+G L+ E VT + +ED+G V ++ + SE NG + SGT +N+ G
Sbjct 438 DGETNLKLREAPRVTRQMFEAEEDAGEV-LQGYLESEMPNGDINRYSGTLYIEENESVTG 496
Query 151 NSSVAAVD 158
SS+ VD
Sbjct 497 RSSLKKVD 504
>PYIW_19782
Length=1380
Score = 30.0 bits (66), Expect = 9.7, Method: Composition-based stats.
Identities = 20/56 (36%), Positives = 31/56 (55%), Gaps = 5/56 (9%)
Query 99 GEGATVTDEAKVLDEDSGTVTVENEVTSEYENGTVEVLSGTEN--DSKNDGRYGNS 152
EG + DEAK DE++G E + + + E+G E SG EN ++ ++G G S
Sbjct 820 AEGNSAEDEAKSEDEEAGD---EEQDSGDNEDGGQEEESGDENEHEASHEGDEGES 872
Lambda K H a alpha
0.305 0.125 0.344 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7175439843
Database: blastdb
Posted date: Feb 23, 2018 11:26 PM
Number of letters in database: 135,609,681
Number of sequences in database: 319,881
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40