Newick Format
(PYU1_G001739:0.19954296,PYIW_18788:0.77356825,(PYAP_22273:0.17682634,PYAR_24096:0.21608120)1.000000:0.65131358);

Protein sequences → MUSCLE → trimAl (automated1) → PhyML (LG Model)

Root the phylogeny or hide taxa by clicking on nodes

Phylogeny (unrooted) rendered using phylotree.js

Reconstruct this phylogeny using PHYLIP Neighbor, FastTree, IQ-TREE (+ ModelFinder) or PhyML?