Newick Format 
(PYIW_18788:0.725570891,PYU1_G001739:0.176582751,(PYAP_22273:0.151999117,PYAR_24096:0.223050970)1.000:0.613353880);

Protein sequences → MUSCLE → trimAl (automated1) → FastTree (Double Precision)

Root the phylogeny or hide taxa by clicking on nodes

Phylogeny (unrooted) rendered using phylotree.js

Reconstruct this phylogeny using PHYLIP Neighbor, FastTree, IQ-TREE (+ ModelFinder) or PhyML?