Newick Format
(PYU1_G0017:0.16319,(PYVX_18175:0.28647,((PHYRA_8110:0.06351,PHYKE_8389:0.03607):0.03354,(((PITG_18450:0.10225,PPTG_17122:0.04149):0.04276,PHYCA_1294:0.06229):0.00492,PHYSO_2840:0.08368):0.02685):0.10462):0.26130,PYIR_26626:0.14545);

Protein sequences → MUSCLE → trimAl (automated1) → PHYLIP Neighbor

Root the phylogeny or hide taxa by clicking on nodes

Phylogeny (unrooted) rendered using phylotree.js

Reconstruct this phylogeny using PHYLIP Neighbor, FastTree, IQ-TREE (+ ModelFinder) or PhyML?