Newick Format
(SDRG_14912:0.00967,((H257_07358:0.09659,H310_07567:0.09508):0.15026,(((CCA17521:0.08364,CCI44232:0.20245):0.43541,(PYAP_22846:0.22611,PYAR_23207:0.34245):0.06454):0.06247,((PYU1_G0059:0.09492,(PYIR_15186:0.05198,PYIW_14743:0.09020):0.05378):0.23295,(PYVX_20854:0.23963,(PHYKE_5841:0.10328,((HYAP_08499:0.31714,PHALS_1156:0.24160):0.00821,((PITG_13739:0.06780,PPTG_09252:0.04792):0.00731,((PHYRA_8167:0.03946,PHYCA_5353:0.03819):0.01215,PHYSO_3150:0.02121):0.00676):0.01745):0.04220):0.10754):0.04441):0.02879):0.45735):0.20107,SPRG_12883:0.00003);

Protein sequences → MUSCLE → trimAl (automated1) → PHYLIP Neighbor

Root the phylogeny or hide taxa by clicking on nodes

Phylogeny (unrooted) rendered using phylotree.js

Reconstruct this phylogeny using PHYLIP Neighbor, FastTree, IQ-TREE (+ ModelFinder) or PhyML?