Newick Format
(PYU1_G001739:0.19936320,PYIW_18788:0.77325792,(PYAR_24096:0.21614081,PYAP_22273:0.17667675)1.000000:0.65117983);

Protein sequences → MUSCLE → trimAl (automated1) → PhyML (LG Model)

Root the phylogeny or hide taxa by clicking on nodes

Phylogeny (unrooted) rendered using phylotree.js

Reconstruct this phylogeny using PHYLIP Neighbor, FastTree, IQ-TREE (+ ModelFinder) or PhyML?